Gene Plav_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2076 
Symbol 
ID5455572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2261067 
End bp2262479 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content64% 
IMG OID640877653 
Productphosphate-selective porin O and P 
Protein accessionYP_001413347 
Protein GI154252523 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3746] Phosphate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000194025 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.9237100000000004e-24 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGTAAAT ACCAATTGAA TATATCCACG ACTTTTAAGT CTGCCCTTTT CGCGAGTACG 
GCGCTTGCGG GCGCCGTACT CGCCGGGCCG GCCTTCGCGG GCGAGCCCGT GGAGAACCGC
GTGCAGAAAC TCGAGGCGAC CATTCTCGAG CTTCAGCGCG AGCTGCAAAC GGTCAAGGAT
GACCAGGCAA TCGCCGCCGC GAAACCGGCG CCTGAATCCC CCGTCATCTT CAAGGGCGGT
CCCGCCTTTG AAGCGGCGGA TGGAAGCTGG TCCTTCAAGG TGCGCGGCCG CATCGAGGCG
GATGCCGCCT TCTACAACAA GAGCGGCGGC AACAGCCCCA TCGATTTCAA CAACGGCACC
GAGCTTCGCC GCGCCCGCAT CGGCGTCGAC GGCAAGGTAC TGAATGACTG GCTCTATCGC
CTCGAAGCGG ATTTCGCCAA GGCGAGCCGC AACGACAGCG CCAGCAGCGA AATCGACGTG
AAGGACGCCT ATATCGCCTT CACGGGCATC GAGAACACCC GCATCACCGT CGGCCAGCAC
AAGACGCCGA ACTCGCTGGA GCAGCTCGTC AGTTCGACCG ACCTCGTCTT TACCGAGCGT
CCGCTCGCCG TCGAGGCGTT CAACCACCGG CTCACCGCCG GCGGCGACTT CAAGGCCGGT
GTGTCGGTCG GCTATACCGG CGAAAACTAC ACGCTGACGA CGGGTCTCTT CGGCGCCAAC
TTTGCCGCCA GCAGCGACAG TTCGGCACTG GGTGCGGCCA ATGACGAAGG CTGGGGCGTG
CATGGCCGCG GCACCTTCGC GCCCATCCAG GAGAAGGGCA AGGTGCTGCA TCTCGGCGCC
TCGGGCTATT GGCGCGACGC CGGCGGCCAG AACGGCTTCG GCGGCACGAG CGTCCGTTTC
CGTTCGGGCC CGGAAGTCTC CGCCGTGGAC AACACGCGCC TCGTCGACAC GGGCAATCTC
GCCGCCGATA CCTACACCTC GGCCGGCGCG GAACTTGGCG GCATCTACGG ACCCTTCCAT
GCCCAGGCCG AATATCTCGT CGCCTCCGTC GACCAGACGG CGGGACTGCC GAGCCTCGAT
TTCGACGGCG GCTATGTGCA GCTCGGCTAT GTACTGACCG GCGAAAGCCG CAACTACAAG
AACGGCCTGT TCTCCCGCGT GAAGCCTGCC AACCCCTTCT CGCTGAAGGG CGGCGGCGCG
GGCGCCTGGG AAATCGCCAC CCGCTTCAGC ACCATCGATC TCAATGACGA TGCGCTGCGC
GGCGGCTCGC AGGACAATTA CACCGCCGCA CTCAACTGGT ATCCGAACGA ATATATCCGC
GTCGGTGTCG ACTATGTCCG CTTCGATGCG GAACGGAACG GCATCACGAC CGAAGGCGAC
GCCGTCGTCA GCCGCATCGG CGTGGCCTGG TAA
 
Protein sequence
MRKYQLNIST TFKSALFAST ALAGAVLAGP AFAGEPVENR VQKLEATILE LQRELQTVKD 
DQAIAAAKPA PESPVIFKGG PAFEAADGSW SFKVRGRIEA DAAFYNKSGG NSPIDFNNGT
ELRRARIGVD GKVLNDWLYR LEADFAKASR NDSASSEIDV KDAYIAFTGI ENTRITVGQH
KTPNSLEQLV SSTDLVFTER PLAVEAFNHR LTAGGDFKAG VSVGYTGENY TLTTGLFGAN
FAASSDSSAL GAANDEGWGV HGRGTFAPIQ EKGKVLHLGA SGYWRDAGGQ NGFGGTSVRF
RSGPEVSAVD NTRLVDTGNL AADTYTSAGA ELGGIYGPFH AQAEYLVASV DQTAGLPSLD
FDGGYVQLGY VLTGESRNYK NGLFSRVKPA NPFSLKGGGA GAWEIATRFS TIDLNDDALR
GGSQDNYTAA LNWYPNEYIR VGVDYVRFDA ERNGITTEGD AVVSRIGVAW