| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2071 |
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| Symbol | |
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| ID | 5456868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2256428 |
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| End bp | 2257537 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640877648 |
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| Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
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| Protein accession | YP_001413342 |
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| Protein GI | 154252518 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 4.39377e-16 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCGACCA TTCCACCCGG CGGGACCATC GGCATTCTCG GCGGCGGCCA GCTTGGGCGG
ATGCTGGCGA TGGCGGCGGC GCAGCTGGGG CTCGCCACGC ATATCTATTG CCCGGATGAG
GAATTGCCCG CGGCGGATGT GGCCGGCGAG GTCACGCGCG CGGCTTATGA CGACGAGGCG
GCGCTGGTGC GCTTTGCCGG GAGCGTCGAG GTCGTCACTT ATGAATTCGA GAATGTGCCG
GCGGAGACGG CGCGCATTTT GAGCGAGCGC GGCATCGTGC GGCCTGGGCC GCTTGCGCTG
GCGACGGCAC AGGACCGCGT GGTCGAAAAG AATTTCCTCG TGAGCCACGG CATCGCGACC
GCACCCTTCG CGGATGTGGC GGACGAAGCG GGCCTGCGCA GCGCCATGGA AGCGATCGGC
ACGCCGTCGA TCCTGAAGAC GCGGCGCTTC GGCTATGACG GCAAGGGACA GGCGAAGATC
GCATCGGCGG CGGACGCGCT TGCCGCCTAT GACGAGATCG GCCGCGCCCC CGCCATCCTC
GAAGGCTTCG TGCCCTTCGA ACGGGAAATC TCCGTGATCG TCGCACGCGG GCTCGATGGA
CGGACGGCGG CTTACGATCC CGTCGAGAAC ATCCACAAGA ACCACATTCT CGACCGCACG
CTGGCGCCCG CCGCGCTGAC CAGGGCGCTT TCCGACGAGG CCTGCGCAAT CGCGGCGCGC
ATCGTCTCCG AACTCGATTA TGTGGGCGTG ATGGGCGTCG AGCTGTTTCT GCTGCCGGAA
AGCGGAAGCA AGAGGCGGCT GCTCGTCAAC GAGATCGCGC CGCGCGTCCA CAATTCCGGC
CACTGGACGA TGGATGCCTG CGCAGTGAGC CAGTTCGAGC AGCATATTCG CGCGATCTGC
GGCTGGCCGC TTGGAAGCCC GGCGCGCCAC TCCGACGCGG TGATGACCAA TCTGATCGGC
GAAGAGGCGG CGGATTGGGC GCGGCTCGCG GCGACGCCGG ACACGGCCCT CCATCTCTAC
GGCAAGCGGG AAGCCCGGCC CGGCCGCAAG ATGGGCCATG CGACAAGGCT TTACCCGCTC
GGAACACGGC CGCCGGTTAC GCCTTCTTAA
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| Protein sequence | MATIPPGGTI GILGGGQLGR MLAMAAAQLG LATHIYCPDE ELPAADVAGE VTRAAYDDEA
ALVRFAGSVE VVTYEFENVP AETARILSER GIVRPGPLAL ATAQDRVVEK NFLVSHGIAT
APFADVADEA GLRSAMEAIG TPSILKTRRF GYDGKGQAKI ASAADALAAY DEIGRAPAIL
EGFVPFEREI SVIVARGLDG RTAAYDPVEN IHKNHILDRT LAPAALTRAL SDEACAIAAR
IVSELDYVGV MGVELFLLPE SGSKRRLLVN EIAPRVHNSG HWTMDACAVS QFEQHIRAIC
GWPLGSPARH SDAVMTNLIG EEAADWARLA ATPDTALHLY GKREARPGRK MGHATRLYPL
GTRPPVTPS
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