| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2065 |
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| Symbol | |
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| ID | 5454305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2252613 |
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| End bp | 2253773 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877642 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_001413336 |
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| Protein GI | 154252512 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000000000000240307 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGCG GCGCAGTCAA GGCATGGTAT CTCGTCCACA AATGGACCAG CCTTGTCTGC
ACCGCTTTTC TCCTGATGCT TTGCATCACC GGCCTGCCGC TCATTTTCCA CGAGGAGATC
GACACGCTTC TCGAAGGGGA GCGGGTGCTG CCGGAGGTGC CGGAAGGCAC ACCGTGGAAA
ACGCTGGACG ATGCGCTTGT CACGGCCACG TCGAAATTTC CCGGCGAGGT TCCGCTCTTC
ATGAGCTTCG ACGAGGACCA GCCGGTGGTG AATGTGACCA CCGGCCCCAC TGTCACGGCC
GGCGTCGAGC AGATGAACTT CATCTCGATC GACCGGCGTA CCGCCGTGCC GGTGCGGACG
CCGGACGATG AAGGCATCAT GCATTTCATC CTCGAGCTTC ACGTCGATAT GTTCCTCGGC
CTGCCCGGCG AGCTTTTCCT CGGCTTCATG GGCACGCTTT TCTTCATCGC CATCGTTTCG
GGCGTCGTCG TTTACACGCC CTTCATGCGC AAGCTTCCCT TCGGCACGGT GCGCGTCACG
CGGAACAACC GGGCGAAGTG GCTCGACATG CATAATCTTA TCGGCGTCGT CACGCTGATG
TGGGCGAGCG TTGTCGGCCT CACAGGCGTC GTCAACACGC TGTCGACGCC GCTGGTCGAT
CTCTGGCGCA TGGACCAGCT TGCCGAAATG GTGGCGCCCT ATGAGGGCAA GCCCGTACCG
CAAGACCTCG CCTCCCTCGA TGAGGCGGTG AAGACAGCCA TGGCCGCCGC GCCCGGCACA
AGGCCGCAAT TCGTCGCCTT CCCGGGTGTG CGCTTCAGCA GCAACCATCA CTATGCGGTC
TGGCTGCGCG GCGCGACGCC CGCGACCGAG CAGCTGCTCA CTCCGGCATT GGTCGACGCG
CAGACAGGCG CGCTCACCGA AATGCGCTCC ATGCCCTGGT ACATGACAAT GCTTCGCCTG
TCGCAGCCGC TTCACTTCGG CGATTATGGC GGCATGCCGA TGAAGATCCT CTGGGCGATC
CTCGACATTG CGGCCATCGT CGTGCTTGGC AGCGGGCTTT ATCTCTGGCT TGCCCGCCGT
TCGCTTCCAG CCCCGGGCAC CGCCGCGCGC CGCGCCGCCG GCCGCAACGG CCTGCTGCCG
GAAGGCGGGG CCGCCGAATG A
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| Protein sequence | MSSGAVKAWY LVHKWTSLVC TAFLLMLCIT GLPLIFHEEI DTLLEGERVL PEVPEGTPWK
TLDDALVTAT SKFPGEVPLF MSFDEDQPVV NVTTGPTVTA GVEQMNFISI DRRTAVPVRT
PDDEGIMHFI LELHVDMFLG LPGELFLGFM GTLFFIAIVS GVVVYTPFMR KLPFGTVRVT
RNNRAKWLDM HNLIGVVTLM WASVVGLTGV VNTLSTPLVD LWRMDQLAEM VAPYEGKPVP
QDLASLDEAV KTAMAAAPGT RPQFVAFPGV RFSSNHHYAV WLRGATPATE QLLTPALVDA
QTGALTEMRS MPWYMTMLRL SQPLHFGDYG GMPMKILWAI LDIAAIVVLG SGLYLWLARR
SLPAPGTAAR RAAGRNGLLP EGGAAE
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