Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2065 |
Symbol | |
ID | 5454305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2252613 |
End bp | 2253773 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640877642 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_001413336 |
Protein GI | 154252512 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000000000000240307 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAGCG GCGCAGTCAA GGCATGGTAT CTCGTCCACA AATGGACCAG CCTTGTCTGC ACCGCTTTTC TCCTGATGCT TTGCATCACC GGCCTGCCGC TCATTTTCCA CGAGGAGATC GACACGCTTC TCGAAGGGGA GCGGGTGCTG CCGGAGGTGC CGGAAGGCAC ACCGTGGAAA ACGCTGGACG ATGCGCTTGT CACGGCCACG TCGAAATTTC CCGGCGAGGT TCCGCTCTTC ATGAGCTTCG ACGAGGACCA GCCGGTGGTG AATGTGACCA CCGGCCCCAC TGTCACGGCC GGCGTCGAGC AGATGAACTT CATCTCGATC GACCGGCGTA CCGCCGTGCC GGTGCGGACG CCGGACGATG AAGGCATCAT GCATTTCATC CTCGAGCTTC ACGTCGATAT GTTCCTCGGC CTGCCCGGCG AGCTTTTCCT CGGCTTCATG GGCACGCTTT TCTTCATCGC CATCGTTTCG GGCGTCGTCG TTTACACGCC CTTCATGCGC AAGCTTCCCT TCGGCACGGT GCGCGTCACG CGGAACAACC GGGCGAAGTG GCTCGACATG CATAATCTTA TCGGCGTCGT CACGCTGATG TGGGCGAGCG TTGTCGGCCT CACAGGCGTC GTCAACACGC TGTCGACGCC GCTGGTCGAT CTCTGGCGCA TGGACCAGCT TGCCGAAATG GTGGCGCCCT ATGAGGGCAA GCCCGTACCG CAAGACCTCG CCTCCCTCGA TGAGGCGGTG AAGACAGCCA TGGCCGCCGC GCCCGGCACA AGGCCGCAAT TCGTCGCCTT CCCGGGTGTG CGCTTCAGCA GCAACCATCA CTATGCGGTC TGGCTGCGCG GCGCGACGCC CGCGACCGAG CAGCTGCTCA CTCCGGCATT GGTCGACGCG CAGACAGGCG CGCTCACCGA AATGCGCTCC ATGCCCTGGT ACATGACAAT GCTTCGCCTG TCGCAGCCGC TTCACTTCGG CGATTATGGC GGCATGCCGA TGAAGATCCT CTGGGCGATC CTCGACATTG CGGCCATCGT CGTGCTTGGC AGCGGGCTTT ATCTCTGGCT TGCCCGCCGT TCGCTTCCAG CCCCGGGCAC CGCCGCGCGC CGCGCCGCCG GCCGCAACGG CCTGCTGCCG GAAGGCGGGG CCGCCGAATG A
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Protein sequence | MSSGAVKAWY LVHKWTSLVC TAFLLMLCIT GLPLIFHEEI DTLLEGERVL PEVPEGTPWK TLDDALVTAT SKFPGEVPLF MSFDEDQPVV NVTTGPTVTA GVEQMNFISI DRRTAVPVRT PDDEGIMHFI LELHVDMFLG LPGELFLGFM GTLFFIAIVS GVVVYTPFMR KLPFGTVRVT RNNRAKWLDM HNLIGVVTLM WASVVGLTGV VNTLSTPLVD LWRMDQLAEM VAPYEGKPVP QDLASLDEAV KTAMAAAPGT RPQFVAFPGV RFSSNHHYAV WLRGATPATE QLLTPALVDA QTGALTEMRS MPWYMTMLRL SQPLHFGDYG GMPMKILWAI LDIAAIVVLG SGLYLWLARR SLPAPGTAAR RAAGRNGLLP EGGAAE
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