| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2027 |
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| Symbol | |
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| ID | 5456232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2213980 |
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| End bp | 2215035 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640877604 |
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| Product | saccharopine dehydrogenase |
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| Protein accession | YP_001413298 |
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| Protein GI | 154252474 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3268] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0488088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.664425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC GGTTCATGAT CTATGGCGCC ACCGGCTATA CCGGCAAACT TGTGGCGCGC
ACCGCGAAGA CACTCGGCAT GAAGCCTTTG CTGGCCGGCC GCAACGAAGC CCGCCTGAAA
TCCATCGCCG CTCAGCATGG CTTCGAGTAT CAGGCCATCT CGCTCGACGA GCCGGAGGCG
CTCGATGCCG GGCTCTCCCA GGTCGATGTC GTGCTCCACA TCGCCGGTCC CTTCTCGCAA
ACATCGAAGC CGATGGTGGA GGCGTGTCTG CGCACCGGCA CGCATTATCT CGACATTACC
GGCGAGATCG ATGTTTTCGA GGCCTGTGCC GCGCGCGACG AGGCGGCGCA GAAGGCTGGC
GTCATGCTGA TGCCCGGCGT CGGTTTCGAT GTCGTGCCGA GCGATTGTCT TGCCGCTCAC
ATGAAGACGC GGATGCCGGA TGCGGTTGAG CTCACGCTCG GCATTTCCGG TCTCGGTCAC
ATGTCGCATG GCACCGCCAA GACCGGCGTC GAAAGCATCG GCAAGGGCAC GCGCATCCGT
CGCGATGGCC GCATTGTCTC CGCAAAGAAG CCGCTTCGCC GCGAGATCGA TTTCGGACAA
GGCGCCAAGC CGTCGATCGC GATCGGGTGG GGCGATGTCT CCACCGCCTG GCACTCCACG
AAGATCCGGG ACATCACCGT CTATTTCGAG AGCAATCCGC AATTCGAGCA AATGGCAAAG
CTCGGCGCCT TCATGCGCTG GGTAATGAGC CGGGGGCCGA TGCAGCGGGC GCTTAAAAAG
CGCATCGAAC AGCAACCCGA AGGGCCGACG GACGAGCAGC GCCGCGAAGG CTTCGCCGTT
CTCTTCGGCG AGGCCGTCAA TGCCGAGGGC GCGCGCGTCC AGTCGCGCCT GCAAACGCCC
GAAGGCTACA CGCTGACGGC AATGACCGGC CTCGAGATCG TCCGGCGGGT GCTCGCCGGC
GATGCGCAGC CTGGTTTCCA GACGCCGTCT TCGGTATTCG GGGCCGATTT CATCACGGAA
TTCGAGGGCT GCACCCGGCA GGACCTCAAC GGCTGA
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| Protein sequence | MSDRFMIYGA TGYTGKLVAR TAKTLGMKPL LAGRNEARLK SIAAQHGFEY QAISLDEPEA
LDAGLSQVDV VLHIAGPFSQ TSKPMVEACL RTGTHYLDIT GEIDVFEACA ARDEAAQKAG
VMLMPGVGFD VVPSDCLAAH MKTRMPDAVE LTLGISGLGH MSHGTAKTGV ESIGKGTRIR
RDGRIVSAKK PLRREIDFGQ GAKPSIAIGW GDVSTAWHST KIRDITVYFE SNPQFEQMAK
LGAFMRWVMS RGPMQRALKK RIEQQPEGPT DEQRREGFAV LFGEAVNAEG ARVQSRLQTP
EGYTLTAMTG LEIVRRVLAG DAQPGFQTPS SVFGADFITE FEGCTRQDLN G
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