Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2010 |
Symbol | |
ID | 5454220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2198265 |
End bp | 2198678 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640877587 |
Product | hypothetical protein |
Protein accession | YP_001413281 |
Protein GI | 154252457 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.392361 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGAAT ATAATCGCCC GCTGCCCTTG CCCACGCCCG AAACCCGGCA TTTCTGGGAA GGCTGCAGGC AAGGCGAACT GAAACTGCAG CGCTGCAAAT CGTGCAAGGA AAGCTACTTT CCTCCCCGCC CCTTCTGCCC CGCCTGCGGC TCGCGCGATG TGGAAGTCTA CAAGGCGAGC GGCAAGGCGA CACTTTACAG CTACGTCATC AACCATCGCC CGAGGCCCGA TTTCGGTGAA GAACCGCATT CGATTGCGGT GGTCGAACTC GCCGAGGGCC CGCGCATGAT GACCAACATC GTGGACTGCC CGCAGACGCC GGAAGCGCTG CAACTCGACA TGGCGCTCGA AGTCACCTTC GAGCAGGCCA ACGAGGAAAT CAGCCTGCCG AAGTTCAAGC CGGCGAAAGG GTGA
|
Protein sequence | MAEYNRPLPL PTPETRHFWE GCRQGELKLQ RCKSCKESYF PPRPFCPACG SRDVEVYKAS GKATLYSYVI NHRPRPDFGE EPHSIAVVEL AEGPRMMTNI VDCPQTPEAL QLDMALEVTF EQANEEISLP KFKPAKG
|
| |