| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1908 |
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| Symbol | |
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| ID | 5456999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 2074523 |
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| End bp | 2075941 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640877485 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001413180 |
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| Protein GI | 154252356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG CGGCGGCGAA GGACGCGCGC GGAGCGGCCG CCGAGCGGTG GCTCTTCCGG
GGGCTGATCG CGCTTGTGGC GCTGGCGCCC TTGCCGCTGG CGAGCAACCG GCCGCTGCCG
GCGGCGCTGC TGGCGCTGGG GGCGGGCCTG CTGCTGATCG GCTGGGGCGC GCATATCGCG
ATTGGAGGGC GCATCGCCGT TTCGCCCGCA AAGCTCCGCC TGCCGCTGAT CCTGTTCGGC
GCGGTGGCGG CGTGGATCGC GGTGCAGGCG CTGCCCATCA TGCCCGCGAG CTGGGCGGAC
CCGATCTGGA CCGAAGCCGC GGCGGCGCTG GGCGAACCGC TCGCCGCCAG CCTGTCGGTG
AACCCGGCGG CCACCTTGTC CGGCCTGATG CGGCTTCTCT CCTATGCGGC CGTCTTCTGG
CTGTCGCTGC AGCTGACGCG GCATGACGGC AATGCGCGCG TAGCACTCGC CGCCGTCGCC
TTCATCGGCG CGGCCTACGC GCTTTACGGC ATCGCGGTCT ATTTCTCCGG CAACAACTGG
ATCCTGATCT GGCGGAAATG GGACTATCAC GAGGCGCTCA GCGCGACCTT CGTGAACCGC
AACTCCTTCG CGACCTTTGC GGGGCTCGCC CTGCTCTGCG CGGTGGCCTG GTTCATCAAC
GGTTTCCGCC ACCTGCTGAC GCTGGAGCGG CCAGCCCGCC AGCGCATGGC GCTTGTCGCG
GAGGCGATGT TCAGCCAGTC GCTCATCCGC ACCATCGCGA CGCTGGCGCT GATGACGGCG
CTGGTTCTGA CGGGATCGCG CGCGGGCATC GTGAGTTCGA TGGCGGCGCT CGGCGTTCTC
ATGCTGGCCT TCGCGGGCGG AGGGACATTG CGGACGAGCC ACGCGGCGGC GGCCGGGGCG
CTTGTCGCCG CCCTCATGGC GGCGATCTTC GCGGTCAATG GCGGGCTCTT CGCCGACCGC
ATCGCACGGG CGGACGCGAA CCTCGCCACG AACGACCGGG GCATCGTCTA TGCGGCGACC
ATGGACGCTG TGGCGACGGC GCCCTGGAAG GGAACGGGCT ACGGCACCTA TCGGGAAGTC
TTCACCGCCT ACCGGCCCGA AGGCCTGCCG ACGCAATTCT ATTGGGACAA GGCGCATAAC
GACTATCTGG AAAACGCACT GGAACTCGGC CTCCCCGCCG CCATCGCGCT CAACCTGTCG
ATCCTGCTGC TCGCGGCCGA GGCGCTGCGC GGCCTGTGGC GGCGGCGGCG CGACCGCACG
GGCCCCGCAA TCGGCGTGGC GGCGACGGTG CTTGTCGGCC TGCATGCCTT TTTCGATTTC
AGCCTGCAAA TGCCCGCCGT CTCGGTGCTC TATGCCTTCA TCATGGGCTT CGCGATGAGC
CAGTCCTGGC CGAAGGCAGG CAGCCGCAGC CCGCGTTAG
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| Protein sequence | MSEAAAKDAR GAAAERWLFR GLIALVALAP LPLASNRPLP AALLALGAGL LLIGWGAHIA
IGGRIAVSPA KLRLPLILFG AVAAWIAVQA LPIMPASWAD PIWTEAAAAL GEPLAASLSV
NPAATLSGLM RLLSYAAVFW LSLQLTRHDG NARVALAAVA FIGAAYALYG IAVYFSGNNW
ILIWRKWDYH EALSATFVNR NSFATFAGLA LLCAVAWFIN GFRHLLTLER PARQRMALVA
EAMFSQSLIR TIATLALMTA LVLTGSRAGI VSSMAALGVL MLAFAGGGTL RTSHAAAAGA
LVAALMAAIF AVNGGLFADR IARADANLAT NDRGIVYAAT MDAVATAPWK GTGYGTYREV
FTAYRPEGLP TQFYWDKAHN DYLENALELG LPAAIALNLS ILLLAAEALR GLWRRRRDRT
GPAIGVAATV LVGLHAFFDF SLQMPAVSVL YAFIMGFAMS QSWPKAGSRS PR
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