Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1895 |
Symbol | |
ID | 5456166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 2057222 |
End bp | 2058688 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640877472 |
Product | rfaE bifunctional protein |
Protein accession | YP_001413167 |
Protein GI | 154252343 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain [TIGR02198] rfaE bifunctional protein, domain I [TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.200594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTAA AAAGCCCGGA TATTCAATCG CTTGTCGAGG GGCTCGGCCA TGCGCGGGTG GCGCTTGCCG GCGATGTCAT GCTCGACCGT TTCGTCTATG GCCATGTAGA GCGGATCTCG CCGGAGGCGC CGATCCCCGT GCTGCGGGTG GATGAGGAGC GGGCGATGCC GGGCGGTGCG GGCAATGTGG CGCGCAATCT CGCCGCGCTC GGGGCCGAGG TCACCTTTCT CTCGGCGGTT GGCGACGATG AAGCGGGCGC CGACCTGAAG GCGGCACTCG AGCGCGAGGG CGGCATCGAG GCGGCGCTCA CCGTCGTTCC GGGCCGGACC ACGACCCAGA AAACCCGCTT CGTCGCGATG AGCCAGCAGA TCCTGCGTGC CGACCGCGAG ACGACGCAAC CGCTCGATGC GGCATCGGCG GAAAGGCTTC TCGCCGCGCT CACCTCCGCA CTGAAAGACC GGCAGGTGCT TGTGTTGTCC GATTACGGCA AGGGAGTGCT GACGCCTGCC TTCGCGCGCG GCGCGATTGC CGCCGCCAGG GCGGCCGGCA TTCCCGTGAT CGTCGATCCC AAGGGCCGCG ATTATTCACT CTATGCGGGC GCAAGCGTCG TAACGCCGAA CCGCAAGGAA CTCGGCGAGG CGACGGGCGC CGCCGTCGAT ACGGATGAGG AAATCGTTGC CGCCGCGCGC GCGCTCATGA AAGCGCATGA CATCGGCGCC GTTGTCGTAA CGCGGGCACA GGCGGGCATG AGCGTCATCA CTGCGGATGG CGCGGTTACG CATCTCAAGG CGGAAGCACG GGAAGTGTTC GACGTGTCGG GTGCGGGAGA TACGGTCGTC TCCACGCTCG CCGCCGCGCT CGGCACCGGC CTCACGCTGG CGGAGGCGGC GGGTCTCGCC AATTCTGCGG CGGGCATCGT CGTCGGCAAG GTTGGCACCG CCGTGGTGCA CCAGGACGAG CTTCTGGCGA AATTGCGCGA ACGCGAACTC TCCATGCTCG AAGCCAAGGT CGCCGGTCTC AAAAGCGCCG AGGACATCGT GGCGGGCTGG CGTGCGCGCG GGCTCACGGT CGGCTTCACC AATGGCTGCT TCGATCTTCT GCATCCTGGA CATGTAACGC TGCTGGAGCG GTCGCGCGCG CTGTGCGACA GGCTCGTCGT CGGCCTCAAC AGCGATGCAT CCGTCAGCCG CCTCAAGGGG CCGGAGCGTC CCGTCCAGCC GGATATCGCG CGGGCAACCG TGCTTGCGGC CCTCGCCTCT GTCGATCTCG TGGTGATTTT CGAAGAGGAT ACGCCGGAGG CGCTCATCAA GGCGCTCAGG CCCGATATTC TGGTCAAGGG CGGCGACTAC ACGATAGACA AGATCGTCGG CGCCGATTTC GTGCAGGCGC ATGGCGGACG CGTCGAGATC GTCGACATCG TGCCGGGCTT CAGCACCACG GGCACGCTCG CGCGTCTCAA GGGCTAG
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Protein sequence | MTVKSPDIQS LVEGLGHARV ALAGDVMLDR FVYGHVERIS PEAPIPVLRV DEERAMPGGA GNVARNLAAL GAEVTFLSAV GDDEAGADLK AALEREGGIE AALTVVPGRT TTQKTRFVAM SQQILRADRE TTQPLDAASA ERLLAALTSA LKDRQVLVLS DYGKGVLTPA FARGAIAAAR AAGIPVIVDP KGRDYSLYAG ASVVTPNRKE LGEATGAAVD TDEEIVAAAR ALMKAHDIGA VVVTRAQAGM SVITADGAVT HLKAEAREVF DVSGAGDTVV STLAAALGTG LTLAEAAGLA NSAAGIVVGK VGTAVVHQDE LLAKLREREL SMLEAKVAGL KSAEDIVAGW RARGLTVGFT NGCFDLLHPG HVTLLERSRA LCDRLVVGLN SDASVSRLKG PERPVQPDIA RATVLAALAS VDLVVIFEED TPEALIKALR PDILVKGGDY TIDKIVGADF VQAHGGRVEI VDIVPGFSTT GTLARLKG
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