| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1893 |
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| Symbol | |
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| ID | 5455412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2054699 |
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| End bp | 2056489 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877470 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_001413165 |
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| Protein GI | 154252341 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0919605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.389908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGCT TTTCTTTTTC GGTCGCCTCG CTTCGGGCGG GCTTCGCCGC AGGCGTCCGG
GCGGAAGATG TCGCGGCGGA GGCGCTCGCG CGCGCGGATG CCTGCGCCGA CCCCGCGATC
TGGATTTCAC GTGTGCCGCA TGAGGATGTG CTGGCGCGGG CCCGCGAACT CGACGCATTA
CCGCGTGAGC AGCGGGCGCG GATGCCCTTG TTTGGCGTGC CGATTGCGAT CAAGGACAAT
ATCGATCTCA CGGGGCTGCC GACAACGGCG GCCTGTCCCG AATTTTCCTA TTCGCCGAAG
GAAAGCGCGG CGGTCGTTCA GCGGCTGGTC GAGGCGGGCG CGATACCGAT GGGCAAGACA
AATCTCGACC AGTTCGCCAC CGGCCTGGTC GGCACGCGCT CTCCGCACGG CGCGCCGCGC
TCGGTCTTCA ACGGCGATTA CATTTCCGGC GGATCGTCGT CCGGTTCTGC CGTTGCCGTG
GCCGCGGGGC TTGTCGGCTT TGCGCTTGGC ACGGACACGG CGGGTTCGGG CCGCGTACCG
GCGGCCTTCA ACAATATTGT CGGGTTGAAG CCGACGCGGG GCTTGCTCTC CACGCGCGGC
GTCGTTCCCG CTTGCCGTTC GCTCGATTGC GTATCCATCT TCGCGCTGAC GGCGGAGGAT
GCGCAAACCG TGTTCGAGGC AGCGGCAGTG TTCGATCCTG CGGATGTCTA TGCGCGCGCT
CGAATGCCGG GAACACCGCC TCTGCCCAAC GCGGGTTTCA CCTTCGCGGT GCCGCGCGCA
TCGGACCTGC AATTCTTCGG CGATGACGAG GCGGCGCGTC TTTTCGGTGA GGCATCCGAA
CGGTTGGAAG AGCTGGGCGG GCGAGCGCGC TGGATCGATT TTTCGATGTT TTCCGAGGCT
GCCGCCCTGC TTTATGACGG ACCGTGGGTT GCGGAACGTA CGGCAGCTGT GGGCGGCTTT
ATCCAGAAGC ACGAGGCGGC CGCCGATCCG ACCGTGCGCG GCATCGTGCT GGGCGGAGGT
GCGCGCAGCG CGGTCGAGAC ATTCGAGGCG ATGTACAAGC TCGAGGCGCT GAAGCGGCGC
ATGACGACGC TGTTCGCCGA TATCGATTTT CTCGTCGTGC CGACCGCGCC GACGATCTAT
CGGGTGGATG AGGTGATGGC GGAGCCGGTG AAGCTCAACA GCCGGCTCGG CACCTACACG
AATTTCATGA ACCTGCTCGA CATGGCGGGC ATCGCGGTGC CAGCCGGCAT CGGCGCGAAG
GGATTGCCTT TCGGCATCAC GTTGGCGGCT CCCGCCTTCT CCGAGGCAAA GCTTATCGGT
CTTGCTTCCG CTTTTGCGGC AGCTCAGGGG CTTGCGCCCG GTGCGCCGGG GCGTCTTGTC
GAGGATGAAG GCTTTATCGA ACTTGCCGTT GTCGGCGCGC ATATGTCCGG CCTGCCGCTC
AATCATGAGC TGACATCGCG GGGGGGCATG TTCGTCGAGC GGACGCGCAC GATGCCGGGC
TACCGCTTCT ATGCGCTGGC GGGCGGCCCG CCCTTCCGGC CGGGCCTCGT ACGAGTTGCC
TCCGGCGGCG CTTCGATCGA GCTTGAAGTC TGGAGGCTGC CGCGCGCGGC GTTTGGCGGC
TTCATAGCCG GCGTGCCGCA GCCCTTGTGC ATCGGCACGC TCGATCTTGC GAGCGGACGC
AAGGTGAAGG GTTTTCTCTG CGAGGAAAGC GGGCTCGACG GCGCGGAGGA GATCACGGCG
CTGGGCGGCT GGCGCGCCTA TATGGCGCGG AAGCTGGAGA AGGCGAGCTA G
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| Protein sequence | MKGFSFSVAS LRAGFAAGVR AEDVAAEALA RADACADPAI WISRVPHEDV LARARELDAL
PREQRARMPL FGVPIAIKDN IDLTGLPTTA ACPEFSYSPK ESAAVVQRLV EAGAIPMGKT
NLDQFATGLV GTRSPHGAPR SVFNGDYISG GSSSGSAVAV AAGLVGFALG TDTAGSGRVP
AAFNNIVGLK PTRGLLSTRG VVPACRSLDC VSIFALTAED AQTVFEAAAV FDPADVYARA
RMPGTPPLPN AGFTFAVPRA SDLQFFGDDE AARLFGEASE RLEELGGRAR WIDFSMFSEA
AALLYDGPWV AERTAAVGGF IQKHEAAADP TVRGIVLGGG ARSAVETFEA MYKLEALKRR
MTTLFADIDF LVVPTAPTIY RVDEVMAEPV KLNSRLGTYT NFMNLLDMAG IAVPAGIGAK
GLPFGITLAA PAFSEAKLIG LASAFAAAQG LAPGAPGRLV EDEGFIELAV VGAHMSGLPL
NHELTSRGGM FVERTRTMPG YRFYALAGGP PFRPGLVRVA SGGASIELEV WRLPRAAFGG
FIAGVPQPLC IGTLDLASGR KVKGFLCEES GLDGAEEITA LGGWRAYMAR KLEKAS
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