| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1887 |
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| Symbol | |
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| ID | 5455101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2046784 |
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| End bp | 2047863 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640877464 |
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| Product | putative transport protein |
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| Protein accession | YP_001413159 |
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| Protein GI | 154252335 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.273004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.972689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCTT TCAAACTCTC ATCGAAATTA TTCGCCGCGG CTCTTGCCGC CATGGCGCTT
GTTTTCATGT CGTTTTCTCC TGCCTATGCC GCGCCGAAAA AGGACTTCAA GGTCGGCTGG
TCGATCTATG TCGGCTGGAT GCCCTGGGGT TATGCGCAGG ACAACGGCAT TGTGAAGAAG
TGGGCCGACA AATACGGCCT CAACATCGAG CTGGTGCAGT TCAACGATTA TATCGAAGGT
ATCAACCAGT TCACGGCCGG CGCCTATGAC GGCATCATGT CGACCAACAT GGATGCGCTC
GCCATTCCCT CCGCCGGTGG CGTCGACTCG ACCATTCTCA TCATCTGCGA TTATTCCAAC
GGCAACGACG TGATCATCCT GAAGGACAAG GATGCGCTTG AGGACATAAA GGGGCAGAAG
GTCAATCTCG TCGAACTCTC CGTTTCGCAT TACACGCTGG CGCGCGGCCT TGAATCCGTG
GGCATGAGCG AAAAGGACGT GACGGTGGTG AACACCTCGG ATGCCGACAT GATCGCGGCG
TGGGGCACCA ATGATGTGAC CGCGATGGTG ACCTGGAACC CGATGGCGGC CGAAATCCTC
ACCGGGGAAA ATGCCAACAA CGTGTTCGAC TCGGAGAAGC TGCCGGGCGA AATCCAGGAC
TCGCTTGTCG TCAACACGAA GACGCTGGAA GAGAACCCGG ACTTCGGCAA GGCGATGACG
GGCATCTGGT ACGAGACGAT GGCGCTGATG TCCGCCGACA ATGAAGCCGC TATCGCCGCG
AAGACCGCGA TGGGCACCGC TTCCGGCACC GACCTCGAAG GCTATGAGGC GCAGCTTGCG
GCGACGGAAA TGTTCTACAC GCCGCAGGAC TATATCTCGT TCGCGGAGAG CGACCTCGAA
AAGACAACCA CCTTCGTGAC CAAGTTCCTG TTCGATCACG GGCTGCTTGG CCAGGACGCG
ACGTCGCCCG GCTATATCGG CATCGAGCTT GCCGACGGAA AAGTCGTCGG GAACGCGGAC
AATGTATTGC TCCGCTACAC GACGGAATAC GCAAAGCTCG CCGCCGACGG CAAGCTCTAA
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| Protein sequence | MTSFKLSSKL FAAALAAMAL VFMSFSPAYA APKKDFKVGW SIYVGWMPWG YAQDNGIVKK
WADKYGLNIE LVQFNDYIEG INQFTAGAYD GIMSTNMDAL AIPSAGGVDS TILIICDYSN
GNDVIILKDK DALEDIKGQK VNLVELSVSH YTLARGLESV GMSEKDVTVV NTSDADMIAA
WGTNDVTAMV TWNPMAAEIL TGENANNVFD SEKLPGEIQD SLVVNTKTLE ENPDFGKAMT
GIWYETMALM SADNEAAIAA KTAMGTASGT DLEGYEAQLA ATEMFYTPQD YISFAESDLE
KTTTFVTKFL FDHGLLGQDA TSPGYIGIEL ADGKVVGNAD NVLLRYTTEY AKLAADGKL
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