Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1864 |
Symbol | |
ID | 5455402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 2023571 |
End bp | 2024362 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877443 |
Product | hypothetical protein |
Protein accession | YP_001413138 |
Protein GI | 154252314 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.844813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.705337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGT CGAAGCCCAA ATCGAGGGAA TCCATATCCG GCAAGCGTTA CCGCGAGGAG CTTTACGAGC TGCAGGTCGA GCTGGTGAAG CTCCAGCGCG AGATCATCGC CAACGGCCTC AAGGTGCTGG TCCTCTTTGA AGGCCGCGAC GGCGCCGGCA AGGATGGCGT CATCAAGCGC ATCACAGCCC ATCTGAGCCC GCGCGAAACC CGCATCGTCG CGCTGGGCAA GCCGTCGGAC CGGCAACAGA CCGAATGGTA CTTCCAGCGT TACACCGAGC ATCTCCCCGC CGCGCAGGAA CTCGTGCTCT TCAACCGGAG CTGGTACAAC CGCGCCGGCG TCGAGCGCGT GATGGGGTTC TGCACGGATG ACGAGTATGA ACGCTTCATG CATTCGGTGC CGATGTATGA AGACATGCTG ATCGGATCGG GCATCGTGCT GGTGAAATAT TATCTCGACA TCTCGAAGCC CGAGCAGAAG GCGCGCCTCG CCGCCCGCGC CCGCGATCCG CTGAAACAGT GGAAGGTTTC GCCGATCGAC CATGTGGCGC TGAAGCATTG GCGCGATTAC AGCCGTGCCC GCGACGAAAT GCTCGCCCGC ACCCACAGCC TCCGCGCGCC CTGGAACATC GTTTGCGCCG GCGACAAGAA GATCGCCCGC CTCAATGTCA TCCGCGATCT CCTGACGCGC ATCGACTACC CCGGCAAGCG CGTGGAGATC GTCGCGCCGG ACCGCGCCAT CGTCACGCCC TTCGAACCCA GCCTGCTGAA ATCGGGCGTC ATCGCGCCAT GA
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Protein sequence | MAKSKPKSRE SISGKRYREE LYELQVELVK LQREIIANGL KVLVLFEGRD GAGKDGVIKR ITAHLSPRET RIVALGKPSD RQQTEWYFQR YTEHLPAAQE LVLFNRSWYN RAGVERVMGF CTDDEYERFM HSVPMYEDML IGSGIVLVKY YLDISKPEQK ARLAARARDP LKQWKVSPID HVALKHWRDY SRARDEMLAR THSLRAPWNI VCAGDKKIAR LNVIRDLLTR IDYPGKRVEI VAPDRAIVTP FEPSLLKSGV IAP
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