Gene Plav_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1864 
Symbol 
ID5455402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2023571 
End bp2024362 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content63% 
IMG OID640877443 
Producthypothetical protein 
Protein accessionYP_001413138 
Protein GI154252314 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.844813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.705337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGT CGAAGCCCAA ATCGAGGGAA TCCATATCCG GCAAGCGTTA CCGCGAGGAG 
CTTTACGAGC TGCAGGTCGA GCTGGTGAAG CTCCAGCGCG AGATCATCGC CAACGGCCTC
AAGGTGCTGG TCCTCTTTGA AGGCCGCGAC GGCGCCGGCA AGGATGGCGT CATCAAGCGC
ATCACAGCCC ATCTGAGCCC GCGCGAAACC CGCATCGTCG CGCTGGGCAA GCCGTCGGAC
CGGCAACAGA CCGAATGGTA CTTCCAGCGT TACACCGAGC ATCTCCCCGC CGCGCAGGAA
CTCGTGCTCT TCAACCGGAG CTGGTACAAC CGCGCCGGCG TCGAGCGCGT GATGGGGTTC
TGCACGGATG ACGAGTATGA ACGCTTCATG CATTCGGTGC CGATGTATGA AGACATGCTG
ATCGGATCGG GCATCGTGCT GGTGAAATAT TATCTCGACA TCTCGAAGCC CGAGCAGAAG
GCGCGCCTCG CCGCCCGCGC CCGCGATCCG CTGAAACAGT GGAAGGTTTC GCCGATCGAC
CATGTGGCGC TGAAGCATTG GCGCGATTAC AGCCGTGCCC GCGACGAAAT GCTCGCCCGC
ACCCACAGCC TCCGCGCGCC CTGGAACATC GTTTGCGCCG GCGACAAGAA GATCGCCCGC
CTCAATGTCA TCCGCGATCT CCTGACGCGC ATCGACTACC CCGGCAAGCG CGTGGAGATC
GTCGCGCCGG ACCGCGCCAT CGTCACGCCC TTCGAACCCA GCCTGCTGAA ATCGGGCGTC
ATCGCGCCAT GA
 
Protein sequence
MAKSKPKSRE SISGKRYREE LYELQVELVK LQREIIANGL KVLVLFEGRD GAGKDGVIKR 
ITAHLSPRET RIVALGKPSD RQQTEWYFQR YTEHLPAAQE LVLFNRSWYN RAGVERVMGF
CTDDEYERFM HSVPMYEDML IGSGIVLVKY YLDISKPEQK ARLAARARDP LKQWKVSPID
HVALKHWRDY SRARDEMLAR THSLRAPWNI VCAGDKKIAR LNVIRDLLTR IDYPGKRVEI
VAPDRAIVTP FEPSLLKSGV IAP