| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1842 |
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| Symbol | |
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| ID | 5454808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1993387 |
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| End bp | 1994406 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877421 |
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| Product | P-type conjugative transfer protein TrbG |
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| Protein accession | YP_001413116 |
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| Protein GI | 154252292 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.254623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGA TCCGTTCGTT CTTGATGGTA AGCATCTCGG CGCTTGTGTT AACCGCCTGC
GCCGACAAGG TGCCGCCGCC CCAGATCCGC TATGACGCGG CCGATCTGCA ACCGGCACAG
CTCGAACCTC AGGCCCCGAA ACCCGTCGAG ATTGTTGCCA TGCCCGAGCC TTTGCCGCTG
CCGGGTCAGT TGCAGCCTCT CGATACGGCA AAACCGAAGC CCGACAAGCG GGTGCCGACG
GAACGGGTCG ACGCCGCCAA CAAGGTGGCG CTGATCGAAC CTATGCGGGA TGGCTATATC
AATGCGATCC AGGTCTATCC CTTCGCCGAA GGAGCGCTTT ACCGGCTCTA TGCGGCACCG
GAGCGCGTCA GCGATATCGC GCTGCAGCCG GGTGAGGAAC TCATCGCCGT CTCGGCCGGC
GATACGGTGC GCTGGGTGAT CGGCGACACA GTAAGTGGCA GCGGCGCCGG CAAACGTATT
CATGTACTGG TGAAGCCTTT CGCCGCCGGG CTCGAGACCA ATCTCGTCAT CACCACCGAT
CGACGTGCCT ACCATCTGGC GCTCGAAAGC ACCGAGACGA CGGCCATGGC CGCGCTCTCC
TGGACCTATC CGCGGGACGA GCTGCTCGCC CTGCAGGCGC GGAATGCGAG GGCCGAAGCA
TCGTCTGCAA TTGCGGGCGG CGTCGATCTC GCCGCGCTCC GCTTTCGCTA CGAAATTACG
GGCGACGATC CGCCCTGGCG GCCGCTCCGC GCCTTCGATG ATGGCGCGAA AGTCTATATC
GAGTTTCCGG CGCGGCTCGA TCAGGGCGAG GCGCCGCCGC TTTTCGTCGT CGGCCCGTCG
GGCGGCAGCG AACTCGTCAA TTATCGCATG CGCGGCCACT ACTACATTGT CGACCGGCTC
TTCGCGGCGG CGGAACTGCG GCTCGGCGAG GCACCGCAAC AGGTGGTACG CATCAGCCGC
GCGGACAGGG TGGTGAACAC GGGCGACAAC CGCCCCGCGC GGCTGCGGCC GGGACGATAG
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| Protein sequence | MTPIRSFLMV SISALVLTAC ADKVPPPQIR YDAADLQPAQ LEPQAPKPVE IVAMPEPLPL
PGQLQPLDTA KPKPDKRVPT ERVDAANKVA LIEPMRDGYI NAIQVYPFAE GALYRLYAAP
ERVSDIALQP GEELIAVSAG DTVRWVIGDT VSGSGAGKRI HVLVKPFAAG LETNLVITTD
RRAYHLALES TETTAMAALS WTYPRDELLA LQARNARAEA SSAIAGGVDL AALRFRYEIT
GDDPPWRPLR AFDDGAKVYI EFPARLDQGE APPLFVVGPS GGSELVNYRM RGHYYIVDRL
FAAAELRLGE APQQVVRISR ADRVVNTGDN RPARLRPGR
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