| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1841 |
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| Symbol | |
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| ID | 5454841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1992674 |
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| End bp | 1993372 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640877420 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001413115 |
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| Protein GI | 154252291 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.377716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTTCA AGCGCGCTAC CGAGCGATAT GGCCGGACCC CCGAACCGGT CACGCCTTAT
CAGAAGGCGG CGCAGCTCTG GGACGAGCGG ATCGGCGCGG CGCGCGTGCA GGCGCGGAAC
TGGCGGCTGA TGGCCTTCGG CTCGCTTGCA CTCAGCGCCG GGCTGTCGGC CGGCCTCTAC
TGGCAATCGC TGCAGTCCCA CGTGATCCCT TACGTCGTCG AGATCGAGCG TTCGGGCGAG
GTTCGCGCCG TGCGGCCCGC CGTCGAGAGC TACACGCCGG GTGACGCCCA GATCGCCTTT
GTGCTGGCGC GCTTCATCTC GAGTGTCCGC TCGCTTTCCT CCGATCCGAT CGTCCTGCGG
AAGAACTGGC TGGAAGCCTA CGACCACGCG ACGGGCAGGG CGGCGACATT CCTCAACGAA
TTCGCGCGCG AGAGCGATCC TTTCAAATCG GTCGGCACGC GCAATGTGTC CGTCGAGGTG
ACGAGCGTCG TCCGCGTCTC GGAGCGCTCC TTCCAGGTCA AGTGGCGCGA GCGGCATTAC
GAGCGCGGCA GTCTCGCCGC GACGACACGC TGGACCGCGA TCCTCACCAC CGCCATTCGA
CCGCCGCGCG ATGCCGAGAC GCTCCGGAAA AACCCGCTCG GTCTTTATGT CGAAGCGCTC
GACTGGTCGC GCGAACTCAA CCCCGGTGAA GCCCCCTGA
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| Protein sequence | MLFKRATERY GRTPEPVTPY QKAAQLWDER IGAARVQARN WRLMAFGSLA LSAGLSAGLY
WQSLQSHVIP YVVEIERSGE VRAVRPAVES YTPGDAQIAF VLARFISSVR SLSSDPIVLR
KNWLEAYDHA TGRAATFLNE FARESDPFKS VGTRNVSVEV TSVVRVSERS FQVKWRERHY
ERGSLAATTR WTAILTTAIR PPRDAETLRK NPLGLYVEAL DWSRELNPGE AP
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