| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1820 |
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| Symbol | |
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| ID | 5456794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1972545 |
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| End bp | 1973300 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640877399 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001413094 |
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| Protein GI | 154252270 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTC TGACGCTGGT TCTCGCGCAT GCGATCCGCA ACGCCGAGCC TGAACATGAC
CTTTCACCGC TCCTCACGGT GAGCATGGCG GTCGAGCCGG AAGCAGGGGA CATGGCGCAA
TGGCGGCCCC TCATCGTCGA AGCCGCGCGG CGTTTCGGCA TTCCGGTGGA CTGGATCGAG
GCCGTCATCG AGGCGGAAAG CGGTGGCCGG ACCGTGCTGG ACGGTGCGCC GATCACCTCG
CCCGCAGGCG CGATGGGCCT GATGCAGCTG ATGCCCGCGA CCTATGCCGA ACTGCGTGCG
CGCCACGGGC TCGGGCCCGA TCCGCATGAT CCTCGCGACA ATATTCTGGC GGGCACCGCC
TATCTCCGCG AGATGCGCGA CCGCTTCGGC TTTCCGGGAC TTTTCGCCGC CTATCATGCC
GGACCGACGC GTTATGTGGC GTGTCTGAAA GGCGAGGAAC CGCTTCCCGA GGAGACCCTT
GTCTATCTCA CTACATTGCT GCCGCGTATC GATCTGGTCG CCGCAGACGA CAGAAAAGTC
GTCCAGAGAA TGACCGCGCG AGCGTCATTC GCGTCAGGAA AGTCGCTCTT CTTTCCGCTC
GGCGGGCATG AAATGCGTGC CGAAATCGGC TCGTCGAGCG ATCCGAAGCG GCCTTCGGAA
CAGCATCTGT TCGTCGGTTC GGGCGGCAAA TTGCAGGGCG AATCCGCAGC CGTTGATGGC
GATCTATTCG CGCCGCTCTC CGGCACCTTC CGTTAG
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| Protein sequence | MDILTLVLAH AIRNAEPEHD LSPLLTVSMA VEPEAGDMAQ WRPLIVEAAR RFGIPVDWIE
AVIEAESGGR TVLDGAPITS PAGAMGLMQL MPATYAELRA RHGLGPDPHD PRDNILAGTA
YLREMRDRFG FPGLFAAYHA GPTRYVACLK GEEPLPEETL VYLTTLLPRI DLVAADDRKV
VQRMTARASF ASGKSLFFPL GGHEMRAEIG SSSDPKRPSE QHLFVGSGGK LQGESAAVDG
DLFAPLSGTF R
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