Gene Plav_1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1814 
Symbol 
ID5455936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1967251 
End bp1968186 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content67% 
IMG OID640877393 
Producthypothetical protein 
Protein accessionYP_001413088 
Protein GI154252264 
COG category[L] Replication, recombination and repair 
COG ID[COG4227] Antirestriction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGAG AACATAATCG TCAGGCCGGG AGGCAGGCGG GGCCGCAGCT TTATGCCGAT 
GTGACGGCAA AGATCGTCGC GGAACTGGAA GCGGGCCGGG TGCCTTGGGT GCAACCCTGG
GACGGGGCCA AGGCCGGGCT CGGTTTGCCG CGCAATGCGG CGACGGCGAA CGCCTATTCG
GGGATCAATA TCCTGATCCT CTGGAGCGCC GTCATCGAGC GAGGCTTTAC CGTCCAGAAC
TGGCTTACCT TCCGGCAGGC ACTCTCGCTC GGCGGGCATG TCCGCAAGGG CGAGAAGGGC
GTGACCCTCG TTTATGCCGA CCGCTTCACG CCGAAGGCGG AGCGCGAACG CGCGGCGGCG
GACGGCGACG AGGCCCGGAG CATCCCCTTC CTCAAGCGCT TCACCGTCTT CAATGTCGCG
CAATGCGACG GCCTGCCGGA CGACCTGCTT GCACCGCCCG CCATACTGCC GGAGAGCGAG
ACCGTGCCCG CCGCCGAGGC GCTGATCACG GCGACCGGGG CGGCATTTCA TGTCGGCGGC
GCGATGGCCT TTTATATGCC GAGCCTCGAC TGCATCGAGG TGCCGCCGCA AGCGGCCTTT
CACGAGCCGG TCAATTATTA CCGCACCTGT TTCCACGAAC TCGGCCACTG GACAGGTCAC
CCCTCGCGGC TGGCGCGCGA TCTTTCCGGG CGCTTCGGCT CGCGCGCCTA TGCGGCGGAG
GAACTCGTCG CCGAAATGGC AAGCGCCTTT GTCTGCGCCG CGCTCGGCAT CGTGCCGACC
GTGCGACATG CTGATTACAT CGCCTCATGG CTCGACCTCT TGCGCGACGA CGACCGCGCC
ATCTTCCGCG CCGCGAGCCT CGCCTCCAAG GCAGCAGATT TCCTGCTGGC GTTCCGCGCG
GAGGGCATAG AGCCGGGCGA GGGGAGGGCG GCATGA
 
Protein sequence
MRGEHNRQAG RQAGPQLYAD VTAKIVAELE AGRVPWVQPW DGAKAGLGLP RNAATANAYS 
GINILILWSA VIERGFTVQN WLTFRQALSL GGHVRKGEKG VTLVYADRFT PKAERERAAA
DGDEARSIPF LKRFTVFNVA QCDGLPDDLL APPAILPESE TVPAAEALIT ATGAAFHVGG
AMAFYMPSLD CIEVPPQAAF HEPVNYYRTC FHELGHWTGH PSRLARDLSG RFGSRAYAAE
ELVAEMASAF VCAALGIVPT VRHADYIASW LDLLRDDDRA IFRAASLASK AADFLLAFRA
EGIEPGEGRA A