| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1812 |
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| Symbol | |
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| ID | 5454052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1966406 |
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| End bp | 1966624 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640877391 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001413086 |
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| Protein GI | 154252262 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.330526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATATGC GCAAGACGGT CGGCGGCAAT GTCAGGCGAA TCAGGCTCAA AAAGGGTCTG
ACCCAGGAGC AGTTCGCCGA GATTTCCGGT TTCAGCCAGC AATACATCAG CGGGCTCGAA
CAAGGCCGCC GCAATCCAAC CGTCGTGACG CTTTATGAAC TCGCGACCGC GTTGGGTGTC
AGTCATCTCG ATCTCCTGCG TCCGGACAGA TCGGGCTGA
|
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| Protein sequence | MDMRKTVGGN VRRIRLKKGL TQEQFAEISG FSQQYISGLE QGRRNPTVVT LYELATALGV
SHLDLLRPDR SG
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