| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1807 |
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| Symbol | |
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| ID | 5455416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1963244 |
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| End bp | 1964443 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640877387 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001413082 |
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| Protein GI | 154252258 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.167167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCG AGCTTACGAA AGAGGACGAT GCCTTCCGCG CGGAAGTCCG CCGGTTCATT
TCGGAAAAAC TCCCCAGGGA GCTCGCGGAG AGAGAGACAG TGGGCGCGTC TGGCGAGCGC
GGTGCGCTCA GGCGCTGGCA GAAGGACCTC TTCGAGAAAG GCTGGGTAGC GGTCAATTGG
CCCAAGCAGT ATGGCGGCAC CGGATGGACG CCGATGCAGA AGCATATTTT CAATGAGGAG
ATGGCCGCCG CTAACGCGCC GCGTCTTTCG CCTTTCGGTC TGTCAATGGT AGGCCCGGTG
ATCTACACCT TCGGCAATGA AGACCAGAAA AAGCAGCATC TGGCGGGCAT TCTTACCGGC
GATGTCTGGT GGTGCCAGGG CTATTCGGAG CCGGGATCCG GATCGGACCT CGCCTCGCTG
AAGACTAGGG CTGTGCGCCA GGGCGACCAT TACATCGTTA ACGGCCAGAA AATCTGGACG
TCGTACGCCC ACGAAGCCGA TTGGATATTC TGTCTCGTGC GAACGGATGA GACCGCTAAA
CCGCAGGAAG GTATCTCGTT CCTTCTGATC GACATGAAGA CGCCCGGCAT CGAGGTGAAG
CCCATCATTT CAATCGATGG CCTGCATCAC TTGAACGAAG TTTTTTTTAC TGACGTCAAG
GTGCCGGTGA CGAATCGCAT CGGCGATGAA AACAAGGGCT GGACCTACGC GAAGTTCCTG
CTCGTCAATG AGCGCACCGG CATTGCAGGT GTTCCTGAGT CCAAGCGCAA GATCGCGCAC
CTCAGAAAAA TCGTGAAACA GGAAAGGCTC GGCGATGGCG CGGCGCTGGC GGACGAACCG
GCATTCATGA CGAGGCTCTC CGAAATCGAG GTAAAGCTTA CGGGTCTCGA ATATACCAAT
CTGAGGATCG TCGCGGAGGA GGTGGCGGGC CGCCCTGCGG GCCCCTCTTC TTCGACCTTG
AAGATTGTCG GGACCGAAGT TCAGCAGGCG TTGTCGGAGC TTGCCGTCGA AGCAGCCGCC
TTCTACGCCA TGCCGTTCCA GAGGGAACAT TTGATGGGAA TCGCCAATGA AGCGCCCATC
GGGCCCGCCT ATGCGGTGAG CGTGACAAGT GCCTATAATT TCGGTCGCGC CGCTTCGATT
TATGGCGGCT CGAACGAAAT CCAGCGCAAT GTCATCGCAA AGGCCGTTCT GGGACTTTGA
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| Protein sequence | MDIELTKEDD AFRAEVRRFI SEKLPRELAE RETVGASGER GALRRWQKDL FEKGWVAVNW
PKQYGGTGWT PMQKHIFNEE MAAANAPRLS PFGLSMVGPV IYTFGNEDQK KQHLAGILTG
DVWWCQGYSE PGSGSDLASL KTRAVRQGDH YIVNGQKIWT SYAHEADWIF CLVRTDETAK
PQEGISFLLI DMKTPGIEVK PIISIDGLHH LNEVFFTDVK VPVTNRIGDE NKGWTYAKFL
LVNERTGIAG VPESKRKIAH LRKIVKQERL GDGAALADEP AFMTRLSEIE VKLTGLEYTN
LRIVAEEVAG RPAGPSSSTL KIVGTEVQQA LSELAVEAAA FYAMPFQREH LMGIANEAPI
GPAYAVSVTS AYNFGRAASI YGGSNEIQRN VIAKAVLGL
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