Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1749 |
Symbol | |
ID | 5456143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1892570 |
End bp | 1893316 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640877324 |
Product | hypothetical protein |
Protein accession | YP_001413025 |
Protein GI | 154252201 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.116456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGCAGG GGCAAAACAA CGCCAAGCGC TCTCGTGGAC GTGGCCGCAA GCCACAGCAG CATTCGGCCA ACCGGGCTTA CGACAGCAAC GGTCCCGACG TGAAGGTCCG CGGCACCGCG GCAACCGTCT GCGAGAAGTA CCAGCAGCTC GCGCGTGATG CGATTTCGGC GGGCGACCGC GTAACCGCGG AAAACTACTA TCAGCACGCT GAGCACTATT ACCGGCTGCT GATGGCGACC CAGCAGGGTC AGGAAGGCCA GCAGCGCCAG CAGAGCAGCC TCGGCTACCG GCCGGACGAA GACGAGGAGA GCGAGAACGA GGGCGATTAC ACGCCTGACG GTCCGCAGCC GCGCCATCGG GGCCAGCCCT GGCACCAGCA GGAAGGCCAG CAGCGCCACA ACAATAATGG CGGGCAACAT CCCAACCAGA CTAATGGCGG CCACAATAAT AACGGCAGCC AGAATAATGG CAGCCAGAAT GCGCCCCGCC ATGACGACCG CTCCGCGCAG TCCTCGGGCG ATGGCGATGA AGCGGCGGAT CGCGCCGCCT TGCAGGCAAG CGGTCAGGAT GAGGGGCAAC CCTCCGGCCA GCCCGTCCAT CAGGGTGGCG AGCAAGGTGG CGAACAGGGC GAGGGCCAGC CGCGCCGCCG CCAGAACCGC CGCCGCCGGC CGCGCAGCGA TGCCGCCGGT GGAGCGGGTG GCGATGCGCC GCGCGCCGAA GCCGCCCCGG TCGAAAGCGC CGACTAG
|
Protein sequence | MRQGQNNAKR SRGRGRKPQQ HSANRAYDSN GPDVKVRGTA ATVCEKYQQL ARDAISAGDR VTAENYYQHA EHYYRLLMAT QQGQEGQQRQ QSSLGYRPDE DEESENEGDY TPDGPQPRHR GQPWHQQEGQ QRHNNNGGQH PNQTNGGHNN NGSQNNGSQN APRHDDRSAQ SSGDGDEAAD RAALQASGQD EGQPSGQPVH QGGEQGGEQG EGQPRRRQNR RRRPRSDAAG GAGGDAPRAE AAPVESAD
|
| |