| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1700 |
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| Symbol | |
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| ID | 5454366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1837643 |
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| End bp | 1840039 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640877275 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001412976 |
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| Protein GI | 154252152 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0658643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGTG CGAGCATCCA TAAAGATCGA AGCGCGGAGC ACTGGCCCAG TCAGCCGGAG
ATTCCGCTCG CCGGCACTTC CGAAGACGGA CTCTTATCTC CTTCGCGGTC TCAGGATATT
CGTCTCGAGC TCTACCGCAC CATCATGCGC GCCTACCGGA CGCTGCCGGT TTTTTTCCCC
ACCGTCGCGA TGGCGCTCGC CTTTACGTTC AATACCACCT ATCCCGAGAT GCTGGTCGCG
GCATGGTGGT TCGTCCTCCT CGCCGTCCAT GTTGAATATG CATTCTTCCA GCGCCGCTTT
TTTGCGGAGG ACAGTGCCGC TATCGACGTC GATGCCTGGA TAAAGGCGAC CGCGATCCGC
TACTGGATCA TGAATGTCGT CTGGCTTGGC CTGCTCCCCC TTTTCTGGCA CCCGGGATCG
GACGTACAGA ACCTTGCCAT ACTGATGGTT TTCGTCGTGC ATGTCGTGAT GGCGTCACAG
ACGGCCTTCC ATCTTGTGCC GATCTTTGTC TCCGTCACTC TGCCGCTGAT AGCGGTCGTC
ATCGCGGTAA GCATCTGCAC CCTTGAAGCG GCTTATATGG CAATCGGGTT CGGTTGCATC
CCGACATATC TCTACCTCGC GCGGATCGCA CAACAGCAAC GGGCCGCGGC CTACGAGACC
TTCAACCTGC GCTTCCGCAA TGCGGACCTC ATCCGCGACA TCGGCAAGGC ACGCGACCTG
TCGGAAGAGG CGAGGCTGCG GGCGGAAGAA GCAAACGCCC AGCTTCAGCG CCGGGAGCAT
CATTTTCGCG CGCTGGTCGA AAATGCATTC GACGTCGTTC TCGTGACGGA TGAACAGGCG
ATCATCCGGT ACGCTTCTCC CGCAGCAGAA AAAATCGGCC TCTCCATCGA CGCCCTTATC
GGCATGAACA GCCTCGACTT CCTGACGAAG GAACAGAAAG AAGAGCTTCT GAAAGACGTC
GCGCCGGGAA ATGGCGCGTC CAGAGTGCTG ACTTATGAAC TATTGGTCCC CCGTCAGGAC
GATCGAAGCA TATGGATCGA AGCAACGCTT ACCAACCTGC TCCACGATGA AAACGTGCGC
GGCTATGTCG TAAATCTACG CGATATAACC GAGCGTAAAC GCGCCGAGAC GGAACAGCGC
AGCCAGTTTG GCGTGCTCCG TGCGCTTGCA ACCGGCGTGG AGCTCGGCGA GGTCATGTCC
CGGCTTGCGC TGGGTTCGGA AGAAGCGCAT CCGGGTGCCC GGGCGGCGGT CTTCCTGCTG
GACGCGAAAG AAGACTTGAT CACTTGCGCC GCGCCGCACC TTCCCGCCGA TTTTCCCGAA
TGGGTGGGGG GCTTCTGGCA AAGCCAGAAA GACCACGACT TCGGCAGAAT GGCGCTCGCA
GGACATAAGA TCGTCGCGAC GGACCTGCAG GAAGAACACC ATGGTGAATC CATATCGAGC
TATATGCGCG GGGCGGGCAT CAGCACGGTC TGGTTCAAGC CCATCCTGTC GCGAAGCGGC
AAGGTCATCG GCGCCTTCGC CATGTATTTC GCGGAGGCGC GAACGCCCGG CAAATGGGAA
GAAGATTATG TAATGGGCGC TGCTCACCTT GCCAGCATCG CCATCGAACG CCGTCGCGCG
GAAGAAGGTC TGCGGCAGGC GACGGAAACG GCGGAAATGG CAAACCGCGC GAAAACAAAA
TTCCTTGCGA ACATGAGCCA TGAGCTGCGC ACGCCGCTCA ACGCCATTAT CGGCTTTTCC
GAAATCATGA GTCAGGAAAT GTTCGGCCCG CTCGGCAGCG ACCGCTACCG GGAATATACG
AACGACATCC ATGGCAGTGG CCGCCATCTT CTCAACGTCA TCGACGATAT CCTCGATATT
TCCAAGATCG AGGCCGGCCG CTACGTCCTT GAGGAAGACG AGATCGACAT GGCGCATGTG
CTCAAGTGGT CGGTCGAGAT GATGCGCGCG CGCACGCTCG AGAAACGCCA GAACGTGAAT
CTGCACTTGC CCGAGGCCAT ACCGAATGTG CGGGCGGATC AGCGCGCCAT GCGCCAGATC
ATGCTGAACC TTCTTTCCAA TGCGTCGAAG TTTACGCCCG CTGAAGGTCG CATCGATCTG
AACGTCAGCA GGAATGACGC CGGCGATCTC ATGGTTTCAG TTGCGGATAG CGGCATCGGC
ATTCCCCGCA ACAAGCTTGA CGAAGTGCTG GAACCCTTCG GGCAAGTCGA CGACACAAGC
GCACGTCAGC ACGGCGGCAC CGGCCTCGGC CTTCCGATTA CCAAGTCGCT CATCGAAATG
CATGGCGGCA GCTTCACCCT CGAAAGCACT CTCGGCGCAG GCACCACGGC AACGATGATA
TTCCCGGCGC ATCGGCTTCT TTCGCTTGAG GGCAAAAGCA AAACCGCCGC GCATTGA
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| Protein sequence | MPGASIHKDR SAEHWPSQPE IPLAGTSEDG LLSPSRSQDI RLELYRTIMR AYRTLPVFFP
TVAMALAFTF NTTYPEMLVA AWWFVLLAVH VEYAFFQRRF FAEDSAAIDV DAWIKATAIR
YWIMNVVWLG LLPLFWHPGS DVQNLAILMV FVVHVVMASQ TAFHLVPIFV SVTLPLIAVV
IAVSICTLEA AYMAIGFGCI PTYLYLARIA QQQRAAAYET FNLRFRNADL IRDIGKARDL
SEEARLRAEE ANAQLQRREH HFRALVENAF DVVLVTDEQA IIRYASPAAE KIGLSIDALI
GMNSLDFLTK EQKEELLKDV APGNGASRVL TYELLVPRQD DRSIWIEATL TNLLHDENVR
GYVVNLRDIT ERKRAETEQR SQFGVLRALA TGVELGEVMS RLALGSEEAH PGARAAVFLL
DAKEDLITCA APHLPADFPE WVGGFWQSQK DHDFGRMALA GHKIVATDLQ EEHHGESISS
YMRGAGISTV WFKPILSRSG KVIGAFAMYF AEARTPGKWE EDYVMGAAHL ASIAIERRRA
EEGLRQATET AEMANRAKTK FLANMSHELR TPLNAIIGFS EIMSQEMFGP LGSDRYREYT
NDIHGSGRHL LNVIDDILDI SKIEAGRYVL EEDEIDMAHV LKWSVEMMRA RTLEKRQNVN
LHLPEAIPNV RADQRAMRQI MLNLLSNASK FTPAEGRIDL NVSRNDAGDL MVSVADSGIG
IPRNKLDEVL EPFGQVDDTS ARQHGGTGLG LPITKSLIEM HGGSFTLEST LGAGTTATMI
FPAHRLLSLE GKSKTAAH
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