| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1680 |
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| Symbol | |
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| ID | 5454658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1816651 |
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| End bp | 1818966 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640877254 |
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| Product | hypothetical protein |
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| Protein accession | YP_001412956 |
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| Protein GI | 154252132 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0387712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.041067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTTA CTAAAGTTCA AATAAAAGGA TATCGCTCGT TCAAGGCAAA GACGACTATT
CTTTTAGATA ATCACATTAC GGTGCTGCTT GGCGCAAATG ATCACGGCAA GACCAATTTT
TTGTCAGCGC TTGAGCATCT GAATGTTGAC CACCCATTTG AAGAAGAGCG GGATTTAAAC
TGGGACGAGG ACGCAGACTC CGGCGAGTTT CCCAGTATTA CATATACGCT GAAGCCTGAG
AGTGGCGAGA AAGCGGGTAT CTCCGTCGCG CTGACGTTCC AGCGACGGAT TGACGTTGTC
ATGGACAAAC TCTCCGCCCT GAATGATCAA AGGAACGGCA TTGAAAGTGA AATCCAACAC
CTCAAGGCAG CCCTAGAATC GGCCGAAGCC GAAGAACCTG AAGAAACTTC GAATGGCGGC
GAAGGGGAAA CAAAACAAAT TCCTCCAGAC GCTGCTGTGT CGAAGTTGCA CCAAAGCAAG
AAAGTTGAGC TTGCTACGCT CGAAGAAATG ATCGAACTCT GGGAGAGAGC AAGAGAGGTG
CTGTCTGTTG CGTCAAAGGG CGATCTTTCA CAAAAAGTAG CAGATACAGC AATTGCGAAC
CTGAAGCGAA GCTTAGTGTC ATCAGATGCG GAACTGAAGA AGGCGAATGA GAGGAAGGCC
TCCACGTCTG ATGCTCTAGC AGCGGCCCAA TCCAACGGTA GCGCTACCGG CGTCGATCAA
GCAAAGAAAA CTCTTAGAGA CATAGACGCA CACATCTCGC GCTGGTTGAA GGAGAGCGCC
AGACTTAGAC AGTCTATCAG CCGACTTGAG AAACACGTGG AGAGCCAAAA GTCTAAAACC
AACAAGGAAT ACCTGGAAAT CATCAACCAG ATCGGCTTGC TAAAGGCTGA CTGTCCAGAG
ACCTTTGATC TCGTGAGAAG CGGTGTCGGT GGAAAGCTGG AATTCGTCCA AGGGGTTGTA
ACGGAACCTC TGCCGCAGTT TTTGAAGCCG TTCTTGCCAA AGGTTCAAAT TTTCTCCTCC
GTTGAGCGTC TTCCCGACGA GGTCAACAAA GATTCCATCC TCAGCGATGA AAACCTCTTT
ATGCGCGGAA TTTTTTACTA CGCGGGCCTT GAGAAAAATC ATTGGGCAAA AGCATTTTCC
CAGAATGATC ACACCAGTAA GCAGTTAGAA GACGCTAGTG TTTCTCTCAA TGAAGTCCTC
AGGCGAGATT GGCGGCAAGG ACGCGAATTG GAATTCAAGC TTCAGCATCG CGGCAACGCC
AAAATCAATC TCGTAATCAG CGACCCTAAG GTGAAAAGAA GATATGTGCG CGTCTCAAGA
CGTAGTTCCG GGTTCGCCCA CTTCTTTGGT CTAAAGACCA TGCTGCACGC TTACGAACAA
GAGGCTCCGT CAGCTTCTTA CATTTGGATG TTTGATGAGC CAGGCATGTC TTTGCATCCG
GATGGTCAGC ACGATTTGCT TCAAGCGCTT GATACAATTT CCAAGCAAAA CCAAGTGATC
TACACGACTC ACTCTCTGTT TATGATTGAT AAAAATTACC CTGCGCGGCA TCGCCTTCTT
GCCAAGGCTA ATGAAGGGAC TCGGGTGGAT GGAAAACCTT TTCTAGGGAA TTGGCGAGCA
GCTATTGATG CTTTGGGGCT CGCGCTTCCG GGCACGATCT TGTTTGCAAC CCACGTCCTC
TTGGTGGAGG GGGCGTCGGA CGCGATATTT TTGAATGCTC TTCTTCAGCG AATGGCGGAG
GAGGGAATGC ACGATCTCGA TATAAACCCA TTGTCAATCA TGCCTGCTGG TGACTCCAAA
GAAGCAGATG CTGTGGCACG CATTCTTATG GAGGCATCCA TGCGCCCGCG GGTAGCAGCG
TTATATGATG GGGATGATGG CGGGAAGAGG AGGAAGGCAA AGCTAGATAA AGTTCTGGAG
AAGGACGCAC ACGTAGTTTT GGAAAAACAA AAGACGATAG AAGACTACCT TCCCGGGTTT
GAAGATCTCT TTGTTCCAAT AGCGGCTGCC TATGGCGCTC GAGTTTTTGG GGGCGATAAA
AAGGAAATTA TTGCCGAAAT TACAGCGGCG CTGAAAGAGG CGGGTAAGGA CGAGAAGCGT
GTAGATGTGG TTCTTGGCGC AATAAAGAAA GCCGCTAAGC TTGATGAGGC GCCGTCAAAA
GTCGGGATTG CTAGGGACTA CGCACATGCG TTGCTGGGAG CTGAGCACAA AATTAGCAAA
GAAGAAGGAG ATCAATTAAA AAAGCTGGTT GCCATGTTGC AGGGGGCACT CAATTTGCCT
ACTCGTACCA CCGCTCAAGA TAGGATTCTG CAGTAA
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| Protein sequence | MRLTKVQIKG YRSFKAKTTI LLDNHITVLL GANDHGKTNF LSALEHLNVD HPFEEERDLN
WDEDADSGEF PSITYTLKPE SGEKAGISVA LTFQRRIDVV MDKLSALNDQ RNGIESEIQH
LKAALESAEA EEPEETSNGG EGETKQIPPD AAVSKLHQSK KVELATLEEM IELWERAREV
LSVASKGDLS QKVADTAIAN LKRSLVSSDA ELKKANERKA STSDALAAAQ SNGSATGVDQ
AKKTLRDIDA HISRWLKESA RLRQSISRLE KHVESQKSKT NKEYLEIINQ IGLLKADCPE
TFDLVRSGVG GKLEFVQGVV TEPLPQFLKP FLPKVQIFSS VERLPDEVNK DSILSDENLF
MRGIFYYAGL EKNHWAKAFS QNDHTSKQLE DASVSLNEVL RRDWRQGREL EFKLQHRGNA
KINLVISDPK VKRRYVRVSR RSSGFAHFFG LKTMLHAYEQ EAPSASYIWM FDEPGMSLHP
DGQHDLLQAL DTISKQNQVI YTTHSLFMID KNYPARHRLL AKANEGTRVD GKPFLGNWRA
AIDALGLALP GTILFATHVL LVEGASDAIF LNALLQRMAE EGMHDLDINP LSIMPAGDSK
EADAVARILM EASMRPRVAA LYDGDDGGKR RKAKLDKVLE KDAHVVLEKQ KTIEDYLPGF
EDLFVPIAAA YGARVFGGDK KEIIAEITAA LKEAGKDEKR VDVVLGAIKK AAKLDEAPSK
VGIARDYAHA LLGAEHKISK EEGDQLKKLV AMLQGALNLP TRTTAQDRIL Q
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