Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1670 |
Symbol | |
ID | 5454910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1804600 |
End bp | 1805550 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640877244 |
Product | diacylglycerol kinase catalytic region |
Protein accession | YP_001412946 |
Protein GI | 154252122 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.630267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCCGC ATGTTGCCGC CATCGTGAAC CCGCGCTCGG GCGGCGGCCG CACGGGCCGC GCCTGGCGGG TGATTTCCGA GACGCTGGAA AAGGAACTGG GGCCGGTGCG CGCGTATTTC ACAGCCTCGC CCTCGACGCC GCATTTCCTG CCGGCCGCCG AACTGACGCG CAAGGCGCTG AAGGACGGCG CGCAACTCGT GATCGCGGTG GGCGGCGACG GCACGATCAG CGAAGTCGTG AACGGCTTTT TTGAAAATGG CGCGCAGATC AACCCGGACG CGCATCTGGC GATCCTGAAT GCAGGGACAG GCGGCGACTT CCGCCGCACC TTCGACCTGC CCGACGAAGC CGCCGACTGC GTGAAGCACA TTGCGAGCGG CAAGACGCGG CGGATCGACA TCGGCCGCCT CACCTTCGTG GCCGAGGACG GGCAGGATAC GGACCGCTAT TTCGACAATA TTGCGAGCTT CGGTCTTTCG GGCGAAACGG TGCGCGCGGT CAACAGCGCC ACCTGGCAGA AGTCGCTCGG CGGCAATTTC ACCTTCTTCT GGGCGACGCT GGTGACGGCC TTTCGCCACA AGACAAGGCC CGTGCGCATC GTGACCGATA CCGGCTTCGA CGAGACGCTG AATATCGGCC TCGCCGCCAT TGCCAATGGC CGCTATTTCG GCAGCGGCAT CAAGATGGCG CCGGAAGCGG AGCCGGATGA CGGGCTTTTC GATATCGTGA TGATGCGCGA CCTCACCTTC ATGGACCTGC TGACGGGCAC CGGCTCGATG AAGGAAGGCA CGCATATCGG AAACGAGAAA GTTTCCGCCA CGCGCGCGAC ATGGGTGACG GCGACACCGC TTGGGCCGGA CCCTGTATTG CTCGATGTCG ATGGCGAGGG ACCGGGCCGC CTGCCCGCCC GCTTTGAAAT TCTTCCCGGC GCGATCACGC TCCGGTGCTG A
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Protein sequence | MMPHVAAIVN PRSGGGRTGR AWRVISETLE KELGPVRAYF TASPSTPHFL PAAELTRKAL KDGAQLVIAV GGDGTISEVV NGFFENGAQI NPDAHLAILN AGTGGDFRRT FDLPDEAADC VKHIASGKTR RIDIGRLTFV AEDGQDTDRY FDNIASFGLS GETVRAVNSA TWQKSLGGNF TFFWATLVTA FRHKTRPVRI VTDTGFDETL NIGLAAIANG RYFGSGIKMA PEAEPDDGLF DIVMMRDLTF MDLLTGTGSM KEGTHIGNEK VSATRATWVT ATPLGPDPVL LDVDGEGPGR LPARFEILPG AITLRC
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