Gene Plav_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1662 
Symbol 
ID5454204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1795936 
End bp1796484 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content63% 
IMG OID640877236 
Producthypothetical protein 
Protein accessionYP_001412938 
Protein GI154252114 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.6897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGCG TTCGGCCTCG CGATGTTCTC GATTTCTGGT TCGGCGCGGG GCCGGAAAAG 
TGGTTCAAGA AGAGCGATGC CTTCGATGCC GATATCAAGC GCCGCTTCGG CGAGGCGCAT
CGCGCCGCCG CCGAAGGGCG TTTCGATGAC TGGATGGGCA ATGCGCAAGG GGCGCTTGCG
CTCATCATTC TGCTCGACCA GTTCTCCCGC AATCTCTACC GCGGGGATCA CCGCGCCTTC
CTGCAGGACC CGAAGGCGCT TTCGCTCGCC GATGAAGCGG TACGCCGCCG TTTCGATGTC
GAAACGCCGG TCACCGTGCG CAAATGGTTC TACATGCCCT ACATGCATGC CGAAGATCTC
GCGGCGCAGG AGCGCGGCCT CGTCTATTTC GCCGAACGTC TCGACGATCC CGAGACGATG
AAGTTTGCCG TCGAGCATCG CGACATCATC CATCGCTTCG GCCGCTTCCC CCACCGCAAC
GCCGTGCTCG GCCGGGTCAC GACGCCTGAG GAGCAATCCT TCCTCGATGA AGGCGGCTTC
GCCGGCTGA
 
Protein sequence
MESVRPRDVL DFWFGAGPEK WFKKSDAFDA DIKRRFGEAH RAAAEGRFDD WMGNAQGALA 
LIILLDQFSR NLYRGDHRAF LQDPKALSLA DEAVRRRFDV ETPVTVRKWF YMPYMHAEDL
AAQERGLVYF AERLDDPETM KFAVEHRDII HRFGRFPHRN AVLGRVTTPE EQSFLDEGGF
AG