| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1616 |
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| Symbol | |
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| ID | 5455366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1752237 |
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| End bp | 1752464 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640877189 |
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| Product | CopG/DNA-binding domain-containing protein |
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| Protein accession | YP_001412892 |
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| Protein GI | 154252068 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4710] Predicted DNA-binding protein with an HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000428775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACCT CTGTCCGCCT CGATGCAGAA CTGGAAGCGC GTCTCGATCT TCTCGCGAAG
AAGACGGGGC GCACCCGCGC CTATTATCTG CGCGAGATCA TCGAGCGGGG GCTCGACGAG
ATGGAAGACT ATTATCTCGC CGCCGACGTG CTGGAGCGTG TCCGCAAGGG CGAGGAAAAA
ACGCATTCCG CGGCCAAGGT GAGAAAAGAC CTTGGCCTGG ACGATTGA
|
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| Protein sequence | MPTSVRLDAE LEARLDLLAK KTGRTRAYYL REIIERGLDE MEDYYLAADV LERVRKGEEK
THSAAKVRKD LGLDD
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