Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1587 |
Symbol | |
ID | 5455776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1724290 |
End bp | 1725498 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877160 |
Product | hypothetical protein |
Protein accession | YP_001412863 |
Protein GI | 154252039 |
COG category | [S] Function unknown |
COG ID | [COG3214] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.447524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCAC TGACAATTTC CAATGCGGAT GCGCGACGGC TCTTTCTCCA CAGCCATGCG CTGTCGGGTC CGCATGCGGA GCCGCACGCG GCCGAGGATA CGCTGACGCT TGTGCGGCGG CTTGGTTTCG TTCAGCTCGA CTCGATCAAT ACCGTCGAAC GCGCGCATCA CCTGATCCTT TTTTCTCGCA CCCCGCATTA CCGCCGCGAG CATCTGGAGA TGCTGCATCA TGACGAGACC GCGCTGTTCG AACATTGGAC GCATGATGCC TCGCTCATTC CCATCGAGTT CTATCCACAT TGGCGCCACC GCTTCCAGGC GGCGAAGGCG CGAATAAAGG AGAACCCGCG CTGGCAGGAC CGCATCGGCC CGGATGGTGC AAAGGTCATC CGTAACGTGA GAGCGCGCAT CCGTCGCGAA GGCGGCCTGA TGGCGCGCGA TTTCGAGGAC AAGGGAAAAG GCGCCTGGTG GGGCTGGGGC CCATCGAAAA CGGCACTGGA AACGCTGTGG CGGACGGGCG AGCTTGCAAT CGCGCGGCGC GAGGGCTTCG AGAAAGTCTA CGATCTCGCT GAACGCGTCA TTCCCGAGCC GATACGCGGC GAACGGCCGA GCCGGACCGC GACAACGGAT TGGGCCTGCC GCGAGGCAAT GACACGTCTT GGCCTTGCAA CCCCGCAGGA ACTGGCGGCC TTCTGGAAGC TTGTGTCCAT CGACCGCGCC AAGGCATGGG CGGTCGCGGC GCTGAAACGA AAGGAAATCG TCGATGTACT GGTGGAAGGC GCCGATGGCA CCCTTCGCCC CGCCCTCGCG CCGGCGGACA TTGAAGATTG CCTCCACGCC GCGCCGCCTC CGCCGGAGGA GATGCGATTT CTCTCGCCCT TCGACCCGGC GATCCGCGAC CGCAAACGCG CGGAGCGGCT TTTCGGCTTT GACTACCGGA TCGAGGTTTT CGTACCCGAG GCGAAGCGGC GCTATGGCTA TTACGTCTTG CCGCTGATCG AGGGAGACAG ATTTATCGGC CGCGCCGACG TGAAGGCGCA TCGCGGCGAA GGGCGGCTTG AAGTCAAAGG CATCTGGCTC GAACCGGGAA TGAAGCTTGC CAAATCACGT GAGCGTGCCG TGTTGCGCGC GTTGACGGAC CTGGGCAGCT TCACCGGAAC TCCAGAGATC GATGCAGACG CTGCTCTACG GCGCACCAAA GCCGGCTGA
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Protein sequence | MTPLTISNAD ARRLFLHSHA LSGPHAEPHA AEDTLTLVRR LGFVQLDSIN TVERAHHLIL FSRTPHYRRE HLEMLHHDET ALFEHWTHDA SLIPIEFYPH WRHRFQAAKA RIKENPRWQD RIGPDGAKVI RNVRARIRRE GGLMARDFED KGKGAWWGWG PSKTALETLW RTGELAIARR EGFEKVYDLA ERVIPEPIRG ERPSRTATTD WACREAMTRL GLATPQELAA FWKLVSIDRA KAWAVAALKR KEIVDVLVEG ADGTLRPALA PADIEDCLHA APPPPEEMRF LSPFDPAIRD RKRAERLFGF DYRIEVFVPE AKRRYGYYVL PLIEGDRFIG RADVKAHRGE GRLEVKGIWL EPGMKLAKSR ERAVLRALTD LGSFTGTPEI DADAALRRTK AG
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