Gene Plav_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1577 
Symbol 
ID5455245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1715504 
End bp1715938 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content63% 
IMG OID640877150 
Producthypothetical protein 
Protein accessionYP_001412853 
Protein GI154252029 
COG category[S] Function unknown 
COG ID[COG3542] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.925208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.213807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTGG ATACCGGCCT CGACGCCGAC GGCATCATCG AACTTCTCCA GTTGAAGCCT 
CATCCTGAAG GCGGCTATTT CGCCGAAACC TTTCGCGATC CGGCGGGCGG CACCCGTGCC
TATTCAACTG CCATCTATTA TCTGCTGAAG GAAGGAGAGC GCTCGCACTG GCACCGCGTG
GACGCCGCCG AAATCTGGCA CTGGTATGGA GGCGGACCTC TGGCTCTTTC CTTCTACGAA
GAAGGCCGCG AGGCAGAGAC GCGCATTCTC GGCAGCAACC TCGATGCGGG GGAGCGCCCG
CAACTCGTGG TGCCCGCAGG CATCTGGCAA GCGGCCGAGC CGCTTGGCCT CTGGACACTT
GTCGGCTGCA CCGTCGCGCC GGGCTTTGAA TTTGGCGGAT TCGAGATGGC GGAGCCGGGC
TGGCAGCCGG GTTAA
 
Protein sequence
MTLDTGLDAD GIIELLQLKP HPEGGYFAET FRDPAGGTRA YSTAIYYLLK EGERSHWHRV 
DAAEIWHWYG GGPLALSFYE EGREAETRIL GSNLDAGERP QLVVPAGIWQ AAEPLGLWTL
VGCTVAPGFE FGGFEMAEPG WQPG