| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1538 |
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| Symbol | |
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| ID | 5453701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1678052 |
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| End bp | 1678720 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877111 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001412814 |
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| Protein GI | 154251990 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.891192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGGCA GGGCGGCGGC GAAAAAGACA GAGGATGCGG GATCGCGCCG CCGGGCACAG
ATGCGCTTCA TTCTGGTCGA GGCCGCGATG CAGCTCTTCG CGCGGCAGGG CGTGGACGCG
ACCACGATCG ACGAGATCGT CGATCTGGCG GGCGTCGCCA AAGGCACCTT CTACAATTAC
TTCACCGACC GGGCCGAGAT CGCGCGCGCC GTCGCGTCGG GCATCCGGCA TGAGCTGAAC
GCCGCCGTCG AAGAGCTCAA TCGCGGCATC GACGATCCGG CGGAGCGCAT CGCGCGCGGT
GTCCGCCTGT TCATGGCCTG CGCCATGCAG AACCCGGTCA AGACAATGCT TCTCGCGCGT
CTCTATGACA GCGGGTCCGG TCTCGACCGG CAGGGCAACG AGCATCTGCT GGGCGATATT
CGCGATGGCA TCGCCAAGGT CCGCATCCAT GTACCGAGCG AGGAAGTGGC GCTTCATCTC
GTCGTCGGCC TCGGCACCAT CGCCATGCGG CATCTGCTCG ACAATGTTGC GGGTCCGGAA
ATCCTGCGCG GGCAGGGCTA TGCGCGCGAC ATCGCAACCG TGCTGCTGCG CGGCCTCGGC
GTTGCCACGG CGGAGATCGA AGACATTCTC GCGCGGCCCT GTGACTTCAG CACCATCGGC
TTCAAATAA
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| Protein sequence | MAGRAAAKKT EDAGSRRRAQ MRFILVEAAM QLFARQGVDA TTIDEIVDLA GVAKGTFYNY
FTDRAEIARA VASGIRHELN AAVEELNRGI DDPAERIARG VRLFMACAMQ NPVKTMLLAR
LYDSGSGLDR QGNEHLLGDI RDGIAKVRIH VPSEEVALHL VVGLGTIAMR HLLDNVAGPE
ILRGQGYARD IATVLLRGLG VATAEIEDIL ARPCDFSTIG FK
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