Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1531 |
Symbol | |
ID | 5453535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1666929 |
End bp | 1667660 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640877104 |
Product | cytochrome c oxidase, cbb3-type, subunit II |
Protein accession | YP_001412807 |
Protein GI | 154251983 |
COG category | [C] Energy production and conversion |
COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.841289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAA AGTTTTCTCA CGCGACCGTC GAAAAGAACT CCATTCTGCT TCTGGTGCTG ACGCTGATCG TCGTCGCCAT CGGCGGCCTT GTGGAAATCG TGCCGACCTT TCTCATCAAG AGCACGATTG AGGACGTAAA GGGCGTTCGT CCCTATAGCC CGCTCGAACT GGCGGGGCGC AACATCTATC TGCGCGAAGG CTGCTACAAC TGCCATAGCC AGATGATCCG TTCGCTCCGC TCGGAAGTGG AACGCTATGG CCATTACTCG CTGGCCGCCG AAAGCAAATA CGATCACCCC TTCCAGTGGG GCTCGAAGAG AACGGGACCC GACCTTGCCC GCGTCGGCGG CAAGTATTCC GACGAATGGC ACCGGCTCCA TATGGAAGCG CCGCGCTCAG TCGTACCTGA ATCGGTTATG CCCGGCTATC CCTTCCTCGC CAGGAAGGCA CTGGACTATC GCAACATCGA CAAGGCGCTG CAGTCGCTTG CGATGGCGGG GGTACCCTAT GGCGAAGAAG AAATAGCCAA TGCCCGCGCC GATCTTCAGG CACAGGCAAC GCCCGACGCC GACATCGACG GGCTGATGCA GCGCTATCCG AAGGCCGTTG CACGCGATTT CGACGGCAAC CCGGCAATGA TTTCCGAACT GGATGCCCTT GTCGCCTATC TCCAGATGCT TGGCACCCTC GTGGACTTCA ATGCCTACGA GAACGCCGAC TTCAAGCAAT AG
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Protein sequence | MSKKFSHATV EKNSILLLVL TLIVVAIGGL VEIVPTFLIK STIEDVKGVR PYSPLELAGR NIYLREGCYN CHSQMIRSLR SEVERYGHYS LAAESKYDHP FQWGSKRTGP DLARVGGKYS DEWHRLHMEA PRSVVPESVM PGYPFLARKA LDYRNIDKAL QSLAMAGVPY GEEEIANARA DLQAQATPDA DIDGLMQRYP KAVARDFDGN PAMISELDAL VAYLQMLGTL VDFNAYENAD FKQ
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