| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1526 |
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| Symbol | |
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| ID | 5456219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1661493 |
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| End bp | 1663709 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640877099 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001412802 |
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| Protein GI | 154251978 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CGGCAACAAG GGCAATGGAA GCGCCGAGGG CGGACCCCGC CCTCTTCGTG
CGGAAAACGC CGGAGGGCCG CGACCGCCTC GACCTCGTCG TTGCCGGCAT GCATTGCGCG
GGATGCCTGC GCAAGGTGGA GCGCGGGCTG ACGGAATTGC CCGGCGTCGA ATATGCCCGC
GCCAACCTGT CGACCAAGCG GGTGACGGTC AGATGGGACC CGGCCCTGCT GAAAGCCAGC
GCCATCACCG GAAAGCTTGG CGAAATCGGC TTCAATGCCG TTCCATTCGA CCAGAAACTC
ACCAGCGCGA TGGATGAGGG CGAAGGCCGC TCGCTCCTGC GCGCCCTCGG CGTTGCCGGG
TTTGCCGCCG CGAATGTGAT GCTCGTCTCG GTTGCCGTCT GGTCAGGCCT CGTGACCGAT
ATGGACGAGA CGACGCGCGC ATTTTTCCAT TGGGTTTCCG CGCTGATCGC GCTTCCCGCC
ATTGCCTATG CCGGCCAGCC CTTCTTCCGC TCGGCACTGC GGGCGCTGCG CGGGCGCGCG
ATGAATATGG ATGTACCGAT CGCGCTCGCG GTTATCCTCG CCACGACGAT GAGCCTCGTC
CAGACCATCG TGAATGCGCG TCATGTGTAT TTCGATGCCA GCGTGACGCT GCTTTTTTTC
CTGCTGATCG GCCGCTATCT CGACGTACAG GCGCGCGCGA AAGCCTGCTC CGCGGCGCAG
AACCTGCTGG GACTGCGCGC TATTGCGGCA ACGCTGATCG CGCCCGACGG TTCGCAGCGT
TCCGTCGCCA TCGAAAATCT CGAGCCGGCG ATGCGCGTCA TCGTGGCTTC GGGCGGGCGC
ATTCCCGCCG ATGGCGAGGT GATGAGCGGC ATCGGCGATG TCGACACCAG CCTCGTGACC
GGCGAGAGCG TGCCGGAAGC TGTGAAGCCG GGCTCTACCG TCTTCGCCGG AACGCTTAAT
CTCGGCGCAC CCCTGGTCAT CCGCGTGACG AAGCGCGACG ATGACAGCCT GCTCGCCGAA
ATCGTGCGGC TGATGGAAAG CGCCGAACAG GGCCGCGCAC GCTATGTCCG CATCGCCGAC
CGCGCGGCAC GCCTTTATTC TCCGGCTGTG CATATCATGG CCTTTGGCAC GCTCGCGCTC
TGGTTCGCCC TCGGCGCGCA TTGGGAAACG GCGCTGACAC ATGCGATTGC GGTCCTCATC
GTCACATGCC CCTGCGCGCT CGGCCTTGCC GTGCCCGTGG TTCAGGTCGT GGCGACAGGA
CGGCTGACGC GCCAAGGCGT TCTCGTGAAG GCAGCAGACG GACTGGAACG GCTTGCACAG
GCGGACACCA TTGTCTTCGA CAAGACCGGT ACGTTGACGC TCGGCCGCCC GCGCCTGATG
AACGCCAAAG AAATCCCCGC CGCCGATCTC GCGCTCGCCA TGGCGCTGGC CGGCAAGAGC
CGCCATCCGC TTTCCGTCGC TCTGGCGGGC TGCGGGCGGA CGCTGCCATT GCCGCTGCTC
GACGACATTC GCGAGGAACC CGGCATGGGC CTTGAGGCGA AGCTTGGCGG CGAGACGATC
CGGCTCGGAA ATGCAGGCTT TGTCGAAGTT TCCGGAAACG GGCCCGATCA CGCGGGCTCC
GAACTCTGGC TCCGGTGCGG CGCCAAACCG GCGGTTTGCT TTCGCTTCGA AGACACGCCA
AGGCCCGATG CGAAGGAAGC CGTTGCCGCG CTGAGAGCAC GCGGCTTTGC CATCGAACTT
CTTTCCGGCG ACCGCGAGCC GGCGGTGCGC AAGCTCGCGG ACGAACTGGG GATAAAGGAG
TGGCGCGCCG CCGCGCGGCC GGATGCGAAG ATCGCGCGGC TGGAAGAACT GGCGGCGCTC
GGCCGGAAAG TCGCGATGAT CGGCGATGGG TTGAACGATG CGCCCGCGCT CCGCGCCGCG
CATGTCTCGA TCTCGCCGTC GGACGCCGCC GATGTGAGCC AGACGGCGGC GGATTTCATC
TTCCAGGGCG CACGGCTGTC GCCCGTCATC GAGGCGGTCG ATGTCGCGCG GCAGGCGCGG
CGGCTTGTCT TCGAGAATTT CGGGCTGGCG CTTGCCTATA ACGCCGTGGC GGTGCCGCTG
GCGGTGGCAG GGTTTGTGAC GCCGCTTGTG GCGGCTGTTG CGATGTCGAG TTCCTCGATC
ACCGTGACGC TCAACTCGCT GCGGCTGAAT TTCGGCGGAA GAAAGGAAGC CAGGTGA
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| Protein sequence | MSDTATRAME APRADPALFV RKTPEGRDRL DLVVAGMHCA GCLRKVERGL TELPGVEYAR
ANLSTKRVTV RWDPALLKAS AITGKLGEIG FNAVPFDQKL TSAMDEGEGR SLLRALGVAG
FAAANVMLVS VAVWSGLVTD MDETTRAFFH WVSALIALPA IAYAGQPFFR SALRALRGRA
MNMDVPIALA VILATTMSLV QTIVNARHVY FDASVTLLFF LLIGRYLDVQ ARAKACSAAQ
NLLGLRAIAA TLIAPDGSQR SVAIENLEPA MRVIVASGGR IPADGEVMSG IGDVDTSLVT
GESVPEAVKP GSTVFAGTLN LGAPLVIRVT KRDDDSLLAE IVRLMESAEQ GRARYVRIAD
RAARLYSPAV HIMAFGTLAL WFALGAHWET ALTHAIAVLI VTCPCALGLA VPVVQVVATG
RLTRQGVLVK AADGLERLAQ ADTIVFDKTG TLTLGRPRLM NAKEIPAADL ALAMALAGKS
RHPLSVALAG CGRTLPLPLL DDIREEPGMG LEAKLGGETI RLGNAGFVEV SGNGPDHAGS
ELWLRCGAKP AVCFRFEDTP RPDAKEAVAA LRARGFAIEL LSGDREPAVR KLADELGIKE
WRAAARPDAK IARLEELAAL GRKVAMIGDG LNDAPALRAA HVSISPSDAA DVSQTAADFI
FQGARLSPVI EAVDVARQAR RLVFENFGLA LAYNAVAVPL AVAGFVTPLV AAVAMSSSSI
TVTLNSLRLN FGGRKEAR
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