Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1380 |
Symbol | |
ID | 5454857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1511501 |
End bp | 1512700 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640876953 |
Product | radical SAM protein |
Protein accession | YP_001412657 |
Protein GI | 154251833 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCA TCGACATTGC GCATGAGAGG AAGACAGCCG CGACAGCGGG CGCTTCCGCG CGGCCGCATC TTGCCGGGCT GACACGCCCG CTGCTCATGG ACGCGCTGAA GGCGTTCGGC CTGCCGGACA ACCAGCTTCG CATGCGCGCC GGGCAGATCT GGAACGGGCT TTACAATCGC GGCTTCACCG ATTTCGAGCG CATGACGACG CTGTCGAAGG AACTGCGCGG CAAGCTGGCG GACGCCTTCG ACATTTCGCG GCTCGAAATC GTGACCGAAC AGAAATCTGT GGACGGCACG CGGAAATGGC TGCTGCGGCT GCCGAGCGGC ATTCCCGGTG TGCCGGGCCC GGAAGTCGAG ACGGTCTATA TTCCGGAAGA AGGACGCGGC ACGCTTTGCG TCTCCTCGCA GGTCGGCTGC ACGCTCACCT GCACCTTCTG CCACACCGGC ACGCAGAAGC TGGTGCGCAA TCTCACCGCC GGAGAAATCG TCGGGCAGAT ACTCCTTGCG CGCGACGCGC TGGGCGAATG GCCGGATGGC GGGCGCAATT CCGAAGACCG CCTCATCACC AATATCGTGA TGATGGGCAT GGGGGAGCCG CTCTACAATT TCGAGAATGT GCGCGACGCG CTGGAAGTCG TTTCCGACGG CGAGGGATTG TCGCTGTCGA AGCGGCGCAT CACGCTGTCG ACATCGGGTG TTGTGCCGAT GATCGAACGC GCGGGCGAGG AAATCGGCTG CATGCTCGCG ATCTCGCTTC ACGCCGTGGA CGACGAGACG CGCAACAGAC TGGTGCCGCT CAACAAGAAA TATCCGATTG CCGAATTGCT GGAAGCCTGC CGGAATTATC CCGGCGTCTC CAACGCGCGG CGCATCACAT TCGAGTATGT GATGCTGAAA GGCGTGAACG ATTCGCTGGA AGACGCGAAG GCGCTGGTGC GGCTGTTGAA GCACATTCCG GCGAAGATCA ACCTGATCCC CTTCAATCCC TGGCCGGGCT CGCCTTACGA ATGTTCCGAC TGGGAACAGA TCGAGAAATT CGCCGACGTC GTCAATCGCG CCGGCTATGC AAGCCCTGTG CGCACGCCGC GCGGCCGCGA CATCATGGCG GCCTGCGGAC AATTGAAAAG CGAGACGGTG AAGGCGCGCG CGAGCGAGCG GTTCAAGGGC GAGAAGGCGG CGGCGCAACC GATCGCCTGA
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Protein sequence | MASIDIAHER KTAATAGASA RPHLAGLTRP LLMDALKAFG LPDNQLRMRA GQIWNGLYNR GFTDFERMTT LSKELRGKLA DAFDISRLEI VTEQKSVDGT RKWLLRLPSG IPGVPGPEVE TVYIPEEGRG TLCVSSQVGC TLTCTFCHTG TQKLVRNLTA GEIVGQILLA RDALGEWPDG GRNSEDRLIT NIVMMGMGEP LYNFENVRDA LEVVSDGEGL SLSKRRITLS TSGVVPMIER AGEEIGCMLA ISLHAVDDET RNRLVPLNKK YPIAELLEAC RNYPGVSNAR RITFEYVMLK GVNDSLEDAK ALVRLLKHIP AKINLIPFNP WPGSPYECSD WEQIEKFADV VNRAGYASPV RTPRGRDIMA ACGQLKSETV KARASERFKG EKAAAQPIA
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