Gene Plav_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1372 
Symbol 
ID5454337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1504722 
End bp1505618 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content65% 
IMG OID640876945 
Productmethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_001412649 
Protein GI154251825 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAA CCATCATCGA CGGCAAGATC ATCGCGACGG AGCTGCGCGC CCGCGTCGCC 
GTCGAAGTCG CACGCCTGAA AAAAGACCAT AGCCTCACGC CCGGCCTCGC CGTCGTTCTC
GTCGGCAACG ATCCCGCAAG CGAGGTCTAT GTCCGCAACA AGGGCATCGC GACCACGGAA
GCGGGCATGA ACTCCTTCGA ATTCAAGCTG CCCGCCGAAA CAAGCGAGGC GGACGTTCTC
GCCAAGGTGC GCGAGCTCAA TGCCGATCCC GCCGTTCACG GTTTCCTCGT GCAGTTTCCC
GTCCCCAATC ACATCAGCCA GCAGGCGGTG ATCGATGCGA TCGATCCGGT GAAGGACGCC
GACGGTCTTC ATCCGCTCAA TGCCGGCCGT CTCGCCAGCG GTCTTCCCGC CATGGTGCCG
GCGACGCCCG AAGGCTGCGT CATCATGGCG AAGCGCGCAG GCGGCGATCT CTCCGGCAAG
CATGCCGTCA TCATCGGCCG CTCCAACCTT GTCGGCAAAC CTGTCGCGCA ATTGCTGCTG
AAGGAAAACT GCACCGTCAC CATCGCGCAT AGCCGCTCGC GCGACCTGCC GTCGATTGCG
CGGCAGGCGG ATATTCTCGT CGCCGCGGTC GGCCGCCCCG GCATGGTGCG GGGCGACTGG
GTGAAGCCCG GCGCCGTGGT CATCGATGTC GGTATCAACC GCGTGCCCGC GCCGGAAAAA
GGCGAGGGCA AGACGCGCCT TGTGGGTGAC GTCCTTTTCG ACGAGGCGGC GGAAGTCGCG
GGCGCGATCA CGCCGGTGCC GGGCGGCGTC GGCCTGATGA CGGTGGCCTG CCTGCTTCGT
AACACGGTCA TCGCCGCCTG CCGTCAGAAC GGCATTGCCT TGCCGCAGGA TTTTTGA
 
Protein sequence
MTATIIDGKI IATELRARVA VEVARLKKDH SLTPGLAVVL VGNDPASEVY VRNKGIATTE 
AGMNSFEFKL PAETSEADVL AKVRELNADP AVHGFLVQFP VPNHISQQAV IDAIDPVKDA
DGLHPLNAGR LASGLPAMVP ATPEGCVIMA KRAGGDLSGK HAVIIGRSNL VGKPVAQLLL
KENCTVTIAH SRSRDLPSIA RQADILVAAV GRPGMVRGDW VKPGAVVIDV GINRVPAPEK
GEGKTRLVGD VLFDEAAEVA GAITPVPGGV GLMTVACLLR NTVIAACRQN GIALPQDF