Gene Plav_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1332 
Symbol 
ID5456034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1468355 
End bp1469197 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content60% 
IMG OID640876903 
Producthypothetical protein 
Protein accessionYP_001412609 
Protein GI154251785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0000000259253 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCAC TTGACGGCAA GACATTCGTT CTGGGGGTCG GCGCGCAGAA GGCGGGAACG 
ACCTGGCTGC AGTCCTATCT CAATCCGAGG CCGGAGGTCT TTCTCTCGCC GCTGAAGGAA
ATGCATTATC TGGAGGCGAA ATATCTGCCC GGCCGCCGCG CGCCGATCGA GAAATATTTC
AAGCGGAAAG AGCGCATCCT GTTTCGCCAG CAGATCTGGC CGAGCGCGCG CCGCCGCGAA
AGGCTGGAGC ATATCAGGGC GCGCCTCGCG ATGGCGGACA GCAATGAAGC CTATTTCGCC
TATTTCGAAA AATACGTGCC CGCCGGCGCT ACGCATTTTG GCGAGATAAC GCCTGAATAT
TCGCTGCTGC CGCGCGCCGC CTTCGAGGAT CTCGGCCGCC GCTTCGAAAA CATGAAGCTC
GTCCTTCTTC TGCGCGATCC CGTCGACAGA TATTTTTCCC ATCTGCGCAT GGATTGGCGT
GCCGGCAGGC TCAAGGGCGA AAGCGAACAG GCGCTGTTCC TGCGGCTCCT GGACGACGAC
ACCTATCTCA GAAATTCCTA TTATCACGAC ACCGTCGCCA CCATCCGCTC GGTCCTGGAC
GAGCGGCAGC TCTTCATCGG CTTCTACGAA GATCTTTTCA ACGATGCGGA AATTACCCGG
CTCTGCGATT TTCTGGGGTT GAGATTCCTC CCCGGCGCCT ATGACGTCAG GGTCAATGCG
GCGGCGAAGC CCGCCACCAT CGCGCCCGAA ATGGCGTCGC TGGCGCGCGA GAAATTCGCG
CCGGTCTATG ATTTCTGCCA GGCGGAGTTC GGCGCCCGCC TGCCGGCCTC CTGGCGCGTC
TGA
 
Protein sequence
MSALDGKTFV LGVGAQKAGT TWLQSYLNPR PEVFLSPLKE MHYLEAKYLP GRRAPIEKYF 
KRKERILFRQ QIWPSARRRE RLEHIRARLA MADSNEAYFA YFEKYVPAGA THFGEITPEY
SLLPRAAFED LGRRFENMKL VLLLRDPVDR YFSHLRMDWR AGRLKGESEQ ALFLRLLDDD
TYLRNSYYHD TVATIRSVLD ERQLFIGFYE DLFNDAEITR LCDFLGLRFL PGAYDVRVNA
AAKPATIAPE MASLAREKFA PVYDFCQAEF GARLPASWRV