| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1331 |
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| Symbol | |
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| ID | 5454434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1466246 |
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| End bp | 1468189 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876902 |
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| Product | acetate--CoA ligase |
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| Protein accession | YP_001412608 |
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| Protein GI | 154251784 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000000000184836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCGATG AAATTTTTCC CGTTCCCGCC GAATGGAAGA AGCGCGCCAT CGTGGATGCG
GAGAAATACC GCCACATGTA TGAGGCAAGC ATCAACGACC CGGAAAGCTT CTGGCGGCGC
GAGGGACTGC GCATCGACTG GATGAAGCCC TATACGAAGA TCAAGGACAC GAGCTTCGAC
CCGCATAATG TCTCGATCAA ATGGTTCGAG GACGGGACGC TCAACGCAAG CGTGAACTGC
ATCGACCGGC ACCTCGAACG CCGCGCCGGC CAGGTGGCGA TCATCTGGGA AGGCGACGAT
CCCTCCATCG ACCGGAAGAT CACCTATCGC GAGCTTCACG ACGAGGTCTG CCGCTTCGCC
AATGTGCTTA AAGCACGCGG CGTGAAGAAG GGCGACCGCG TCACGATCTA CATGCCGATG
ATCCCGGAAG CGGCCTATGC GATGCTCGCC TGCGCGCGGA TCGGCGCGGT GCATTCGGTG
GTCTTTGGCG GCTTCTCGCC GGACAGCCTG GCGGGGCGCA TTGTGGACTG CGCTTCCAGC
TGCGTCATCA CGGCGGATGA AGGCGTGCGC GGCGGAAGGA AAATTCCGCT GAAAGCCAAT
ACCGACGAGG CGCTGAAGAA ATGCCCCGGC GTCAAAAGCG TGATCGTCGT GAAGCATACC
GGCGGCGCCG TCGCCATGGA GAAAGGACGC GACGTCTGGT ACGCAGAAGA AGCGGCGAAG
GTTTCCGCCA CCTGCGCGCC GGAAGAGATG AACGCGGAAG ACCCGCTTTT TATTCTGTAT
ACGTCCGGTT CGACCGGAAA GCCAAAAGGC GTGCTGCACA CGACCGGCGG CTACATGGTC
TATGCGTCGA TGACGCATCA ATATGTCTTC GACTATCACG ACGGCGACAT TTACTGGTGC
ACGGCGGATG TCGGCTGGGT GACGGGCCAC AGCTACATCC TCTACGGGCC GCTGGCGAAC
GGCGCGACGA CGCTGATGTT CGAGGGCGTG CCGAACTATC CCGACGCCTC GCGCTGCTGG
CAGGTGATCG ACAAGCATGA AGTGAATATT TTCTACACCG CGCCGACCGC CCTTCGTGCA
TTGATGCGCG AAGGCGAGGA GCCGGTGAAG AAGACGAGCC GCAAATCGCT GCGGCTCCTC
GGCTCCGTCG GCGAACCGAT CAACCCGGAA GCCTGGCTCT GGTATCACCG CGTGGTGGGC
GACGGGCGCT GCCCGATCGT CGATACATGG TGGCAGACGG AAACCGGCGG CATATTGATC
TCGCCGCTGC CCGGCGCCAT CGCGACGAAG CCGGGCTCGG CAACGAAGCC TTTCTTCGGC
GTGCAGCCGG TGATCGTGGA CGCGGAAGGA AACGTGCAGG AAGGCGCGAC GACCGGCAAT
CTCTGCATCG ACGATAGCTG GCCCGGCCAG ATGCGCACCG TCTATGGCGA TCATCAGCGC
TTCGTCGAAA CCTATTTCAT CCAGTATCCC GGCCGCTACT TCACCGGCGA TGGCTGCCGC
CGCGACGAGG ACGGCTATTA CTGGATCACC GGCCGCGTCG ACGACGTGCT GAACGTCTCG
GGCCATCGCA TGGGAACGGC GGAAGTCGAA AGCGCGCTGG TCGCGCATCC GAAAGTCGCG
GAAGCCGCCG TGGTCGGCTA TCCGCACGAC ATCAAGGGCC AGGGCATCTA TGCCTATGTG
ACGCTGATCG CGGGCGAGGC GGCGACGGAA GAGTTGCGGA AGGAACTGGT GACCTGGGTG
CGGAAAGAGA TCGGCCCGAT CGCCTCGCCG GACCTCATCC AGTTCGCGCC CGGCCTGCCG
AAAACGCGCT CCGGCAAGAT CATGCGCCGC ATCTTGCGCA AGATCGCCGA GGACGACTTC
TCCAATCTCG GCGACACCTC GACACTGGCC GACCCCTCCG TCGTCACCGA CCTCGTGGAC
AACCGGCAGA ACAAGGCGGG GTAG
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| Protein sequence | MSDEIFPVPA EWKKRAIVDA EKYRHMYEAS INDPESFWRR EGLRIDWMKP YTKIKDTSFD
PHNVSIKWFE DGTLNASVNC IDRHLERRAG QVAIIWEGDD PSIDRKITYR ELHDEVCRFA
NVLKARGVKK GDRVTIYMPM IPEAAYAMLA CARIGAVHSV VFGGFSPDSL AGRIVDCASS
CVITADEGVR GGRKIPLKAN TDEALKKCPG VKSVIVVKHT GGAVAMEKGR DVWYAEEAAK
VSATCAPEEM NAEDPLFILY TSGSTGKPKG VLHTTGGYMV YASMTHQYVF DYHDGDIYWC
TADVGWVTGH SYILYGPLAN GATTLMFEGV PNYPDASRCW QVIDKHEVNI FYTAPTALRA
LMREGEEPVK KTSRKSLRLL GSVGEPINPE AWLWYHRVVG DGRCPIVDTW WQTETGGILI
SPLPGAIATK PGSATKPFFG VQPVIVDAEG NVQEGATTGN LCIDDSWPGQ MRTVYGDHQR
FVETYFIQYP GRYFTGDGCR RDEDGYYWIT GRVDDVLNVS GHRMGTAEVE SALVAHPKVA
EAAVVGYPHD IKGQGIYAYV TLIAGEAATE ELRKELVTWV RKEIGPIASP DLIQFAPGLP
KTRSGKIMRR ILRKIAEDDF SNLGDTSTLA DPSVVTDLVD NRQNKAG
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