| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1327 |
|---|
| Symbol | |
|---|
| ID | 5455269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1463553 |
|---|
| End bp | 1464416 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640876898 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_001412604 |
|---|
| Protein GI | 154251780 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.533301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.000000000342604 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG TCAAAACCGG AATGCTGCTC GCCGCCATGA CCGCGCTTTT CATGGGCCTC
GGCTTTCTGA TCGGCGGTCC CAAGGGCGCC ATGATCGCTT TTTTCATCGC CGCCGCGATG
AACCTTTTCG CCTACTGGAA TTCCGACAAG ATGGTGCTGC GCATGTACAA GGCGCGGCAG
GTGGACGAGA CGACGGCGCC GAACTATGTC GGCATCGTGC GGCAGCTCGC GCAGAATGCC
GGCATTCCGA TGCCCGCCAC CTACATCATC GACAATCCGC AGCCGAACGC CTTTGCCACC
GGCCGCGACC CTGAACACGC CGCCGTCGCG GCGACCACCG GCCTCATCAA GATGCTGACG
CCGGAGGAAC TGGCCGGCGT GATGGCGCAT GAGCTTTCGC ATATCAAGAA CCGCGACACG
CTCATCATGA CCGTGACGGC GACGATTGCC GGCGCCATTT CCATGCTGGC GAATTTCGCG
CTTTTCTTCG GCGGCAACCG CAACAATGCG GGCGGGCTTA TCGGCACGCT GGCGCTTGCG
ATCCTTGCGC CGATGGCAGC CGCCCTGGTG CAGATGGCGA TCAGCCGCAC GCGCGAATAT
TCGGCCGATG CGGGCGGCGC GGAAATTTCG GGCAATCCGC TCTGGCTTGC CTCGGCCTTG
CAGCGGATCG ACGAAGCGGC GCGGCGCGCG CCCAATGAGG CGGCGGAAGC AAACCCCGCC
ACCGCGCATA TGTTCATCAT CAATCCGCTG AACGGACGCG GCCGCGACAA TCTTTTCTCC
ACCCACCCCG CGACCGGCAA CCGGATCGAC GCCCTGCGCC GCATCGCAGA GACGATGGGC
AGCCGCTCAC GTCCCTGGGG CTGA
|
|---|
| Protein sequence | MNTVKTGMLL AAMTALFMGL GFLIGGPKGA MIAFFIAAAM NLFAYWNSDK MVLRMYKARQ
VDETTAPNYV GIVRQLAQNA GIPMPATYII DNPQPNAFAT GRDPEHAAVA ATTGLIKMLT
PEELAGVMAH ELSHIKNRDT LIMTVTATIA GAISMLANFA LFFGGNRNNA GGLIGTLALA
ILAPMAAALV QMAISRTREY SADAGGAEIS GNPLWLASAL QRIDEAARRA PNEAAEANPA
TAHMFIINPL NGRGRDNLFS THPATGNRID ALRRIAETMG SRSRPWG
|
|---|
| |