| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1326 |
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| Symbol | |
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| ID | 5456840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1462182 |
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| End bp | 1463504 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640876897 |
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| Product | sun protein |
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| Protein accession | YP_001412603 |
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| Protein GI | 154251779 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000000000516212 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCGCG CAGACGAAAC CGGCCTTGCC GCCCGCCAGG GCGCCGCCTC CATTCTCACA
GCCGTGCTGA AAGAGCGCCG CGCCTTCGAC GATGCCTTCA TCGCCGAAGC CGCAAGCGGG
CATCTGCGGA ATGCCGAGCC CCGCGACCGC GCCTTTGCCC GCGCCATCAC CGCGACGGCG
CTCCGCCGCC TCGGCACCAT CGACCACATT CTCTCGCTTC TGATCGACAA GGAACTGCCG
AAGCGCGCGG GCGCCACCGA GAACATTCTC CGCGCCGGGC TGGCCGAAAT CCTGTTTCTG
CGCGTCGCCG CCCATGCGGC GGTCGGCATG AACGTGGAGG CGGCGTCGCG CGACGAGAAT
GCGCGCCACT TCAAGGCACT GGTGAACGCG GTGCTGCGCC GCGCCACGCG CGAAGGCGAC
GCCATTCTCG ATAATCTCGA TACGGAACGT CTCGACACGC CGGACTGGCT TTGGCAAAGC
TGGAGCGCGG CCTATGGCGA GGAGACCGCG CGCGCGATCG TACGGATGCA TTATGCCGAC
CCGCCGCTCG ACATCAGCGT GAAGCGCGCC GAAGAGCGGA TGACAATCGC CGAGGCGCTG
GGCGCGACGG TCCTGCCGAG CGGTACGCTT CGCCTCGAGG ATGCCGGACG CATCGAGGAC
CTGCCGGGCT TTGACGACGG CGCATGGTGG GTGCAGGACG CCGCCGCCGC GCTGCCCGCG
AAGCTGCTCG GCGATGTGAC CGGCCGCGAA GTGCTCGACC TCTGCGCGGC ACCGGGCGGC
AAGACGGCGG AGCTTGCGGC GGCGGGCGCG CATGTGACGG CGCTCGACCG CTCGCGCCCG
CGCCTCGACC GGCTGGAACA GAACCTTTCC CGGCTCGGGC TTGAGGCGAA AACCGTGGTG
GCGGACGCAA CCGCCTACGC GCCGGGACGC ACATGGGACC TCATCCTGCT CGACGCGCCC
TGCAGCTCCA CCGGAACGGC GCGGCGCCAC CCCGATGTGC CGCATCTGAA ATCGCCCGCC
GACCGCGACA AGCTGGCGGC CTTGCAGGCA AGACTGCTCG CCCATGCGGC AACGCTGCTC
GCGCCGGGCG GCACGCTCGT CTATTGCACT TGTTCGCTGG AGCCTGAGGA AGGTGTGCGC
CAGGTTGAAG CGTTTCTCGC CGCGCATCCG GCTTTCCGCC GCCAGCCTGT CGGAGTGGAG
GACGTTGCCG GACTGGGTGA GATCGTCACG GGTGAGGGCG ATTTGCGCAC GCTGCCCTGC
CACCTCGCCG CGCTGGGCGG GCTGGACGGG TTTTATGCCG CGAGGCTGAC ACGCGCATCC
TGA
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| Protein sequence | MNRADETGLA ARQGAASILT AVLKERRAFD DAFIAEAASG HLRNAEPRDR AFARAITATA
LRRLGTIDHI LSLLIDKELP KRAGATENIL RAGLAEILFL RVAAHAAVGM NVEAASRDEN
ARHFKALVNA VLRRATREGD AILDNLDTER LDTPDWLWQS WSAAYGEETA RAIVRMHYAD
PPLDISVKRA EERMTIAEAL GATVLPSGTL RLEDAGRIED LPGFDDGAWW VQDAAAALPA
KLLGDVTGRE VLDLCAAPGG KTAELAAAGA HVTALDRSRP RLDRLEQNLS RLGLEAKTVV
ADATAYAPGR TWDLILLDAP CSSTGTARRH PDVPHLKSPA DRDKLAALQA RLLAHAATLL
APGGTLVYCT CSLEPEEGVR QVEAFLAAHP AFRRQPVGVE DVAGLGEIVT GEGDLRTLPC
HLAALGGLDG FYAARLTRAS
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