| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1297 |
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| Symbol | |
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| ID | 5455433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1429017 |
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| End bp | 1430408 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640876867 |
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| Product | glutamate--putrescine ligase |
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| Protein accession | YP_001412574 |
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| Protein GI | 154251750 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0174] Glutamine synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.770979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.671991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATGG GCAGCGAAGA GAACGAGACG AAAGAGACGG TCAACAACGA GGAAGACCTG
ATCAAATGGC TTAGGGACCG CCGCATAACC GAAGTGGAAT GCATGGTGTC GGATATGGCC
GGCATCGCGC GCGGCAAGAT TATCCCGACG CGAAAATTCA TCGCTGGACT CAGCGATCGC
TCGCTGAAAC TTCCAGAATC CATCTTCGGT CAGACAGTGA CCGGCGACTA TGTCGACAGC
GATTTTCTCG GCGACATTGA ACCGGACATC ATTCTCGATC CGGATCCCAC CACTGTCCGC
GTCGTTCCCT GGTACGACGA ACCCACCGCC CAGATCATCT GCGATGCGAA TTATCGCGAC
GGCAAGCCTG TGCCGATTGC ACCGCGCAAC GTGCTGAAGC GGGTGCTCGC ACTTTTTGAG
GAGAAGGGCT GGGCACCGGT CGTAGCGCCG GAGATCGAAT TTTATCTGGC TGCCAAGAAC
ATTGACCCAG ATTACCCGCT CGAGCCACCC GTGGGCGCGA ACGGCCGCCA GGAAACCGCG
CGGCAGTCCT ATGGTATCGA CGCTGTGAAC GAGTTCGATC CCATCTTCGA GGACATGTAC
GATTTCTGCG AAGCACAGGA TCTCGATATA GATACGCTCA TCCACGAATC CGGCGCAGCG
CAGGTCGAAA TCAATTTCGA TCACGGTGCA CCGCTCGACA TTGCGGATCA GGCATTTCTT
TTCAAGCGCA CGATGCGGCA GGCGGCCCTC CGCCACGGCA TCTATGCCAC CTTTATGGCC
AAGCCCTATG AGGGCGAACC CGGCAGCGCC ATGCACATCC ATCAGTCGAT CGTAAGCAGC
GGCACGGGCG ACAACCTCTT CGCGACGAAG CAGGGCAAGG ATACAAAGCT TTTCCTCTCC
TATATCGCCG GCCTCCAGAA GTATTTGCCT GATGCCATGG CTCTGATCGC ACCCAATGTG
AACTCGTACC GCCGGATCGT CCGCGACCAT GCGGCGCCCA TCAACACTCA TTGGGGCCAT
GAGAACCGCA CAGTTGGCCT TCGCGTTCCG GAAGCAAAAC GGCAGGGCCG CCGGATCGAA
AACCGCGTGC CGGGCGCGGA TGCGAACCCC TATCTCGCCA TCGCGACCTC GCTCGCCTGC
GGCTATATCG GCATGGTGAA CGATCTGAAG CCGACGAAGG AGATGACCGG CAACGCCTAT
GACAGCAAGC GCTACGCGCT GCCACGCCAC CTGCTCGATG CGCTGGGCAA CTTACGGACA
GCGACAGAGC TGAAGGAAGT GCTCGGCGCC GATTTCGTCA CGCTCTACAT GGACGTCAAA
CTGACCGAAC ACGAAGCCTA TCAGCAGGTG ATTTCGGCCT GGGAGCGCGA ACATCTGCTG
TTGAATGTGT GA
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| Protein sequence | MAMGSEENET KETVNNEEDL IKWLRDRRIT EVECMVSDMA GIARGKIIPT RKFIAGLSDR
SLKLPESIFG QTVTGDYVDS DFLGDIEPDI ILDPDPTTVR VVPWYDEPTA QIICDANYRD
GKPVPIAPRN VLKRVLALFE EKGWAPVVAP EIEFYLAAKN IDPDYPLEPP VGANGRQETA
RQSYGIDAVN EFDPIFEDMY DFCEAQDLDI DTLIHESGAA QVEINFDHGA PLDIADQAFL
FKRTMRQAAL RHGIYATFMA KPYEGEPGSA MHIHQSIVSS GTGDNLFATK QGKDTKLFLS
YIAGLQKYLP DAMALIAPNV NSYRRIVRDH AAPINTHWGH ENRTVGLRVP EAKRQGRRIE
NRVPGADANP YLAIATSLAC GYIGMVNDLK PTKEMTGNAY DSKRYALPRH LLDALGNLRT
ATELKEVLGA DFVTLYMDVK LTEHEAYQQV ISAWEREHLL LNV
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