| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1250 |
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| Symbol | |
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| ID | 5454759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1383608 |
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| End bp | 1384114 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876820 |
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| Product | protein-export protein SecB |
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| Protein accession | YP_001412527 |
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| Protein GI | 154251703 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.813079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGATC AGGGCACGAA TAATGGCGAG AGCGGCAATG GCGGCGCGCA GAACGGCGAG
GCGCCGCAGC TTCGTGTCCT TACCCAATAT GTGAAAGACC TCTCCTTCGA GAACCCCAAC
GCGCCGCAAT CTCTCGGGCC CGCCGACGAA CAGCCAAGCA TCAATGTCCG CGTCGATGTC
GGCGTGAAGC GCATGAGCGC CACCGATTTC GAGGTCGCGC TCAAGATCGG CGCCGAGGCG
ACGGTGAAAG ACAAGGCGAT GTTCCTTGTC GAGCTCGACT ATGCGGGGCT CTTTCGCGTC
GTCAATGTGC CGGAGCAGGA TCTCGAGGCG GTGCTTGTCA TCGAATGCCC GCGCCAGATT
TTCCCGTTCG CCCGGCGCAT TCTCGCCGAT ACGACGCGGG ATGGCGGTTT CCCGCCGCTG
ATGATCGATC CGATCGATTT CGTCGGGCTC TACAATCAGC GCCACCAGCA GGCGCCCGAT
GCGGCAGCAG CGGCCAAACC GAACTGA
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| Protein sequence | MSDQGTNNGE SGNGGAQNGE APQLRVLTQY VKDLSFENPN APQSLGPADE QPSINVRVDV
GVKRMSATDF EVALKIGAEA TVKDKAMFLV ELDYAGLFRV VNVPEQDLEA VLVIECPRQI
FPFARRILAD TTRDGGFPPL MIDPIDFVGL YNQRHQQAPD AAAAAKPN
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