| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1240 |
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| Symbol | hslU |
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| ID | 5455278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1374160 |
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| End bp | 1375467 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876810 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001412517 |
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| Protein GI | 154251693 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.543485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTT TTTCCCCGCG TGAGATCGTT TCCGAACTCG ATCGCTATAT CGTCGGACAG
CGCGACGCCA AGCGCGCCGT CGCCATTGCG CTCCGCAACC GCTGGCGGCG CCAGCAGCTG
CCGGATGCCT TGCGCGACGA AGTTCTGCCG AAGAACATCC TGATGATCGG ACCGACCGGC
GTCGGCAAGA CGGAAATTTC ACGCCGCCTC GCGAAGCTTG CCGAAGCGCC CTTCCTGAAA
GTCGAGGCGA CGAAGTTCAC CGAGGTCGGC TATGTCGGCC GCGACGTGGA ACAAATCATC
CGCGACCTCG TGGAAATCGC CCTCGCCATG ACGCGCGAAC GCAAACGCAA GGATGTGCAG
GCGAAGGCGC ATGTCGCCGC CGAAGGCCGC GTTCTCGATG CGCTGGTCGG CGCCAATGCG
AGCGAGGCAA CGCGCGAGAG CTTCCGCCGC AAGCTTCGCG ACGGCGAGCT GGACGAAAAG
GAAATCGAGG TCGAGGTGGC AGATAGCGGC GGCGGCATGC CGACCTTCGA CATTCCCGGC
ATGCCGGGTT CGCAGATGGG GATGATCAAT CTCAGCGACA TCATGGGCAA GGCCTTTGGC
GGCCGAACGA AGACGCGGCG CATGGCCGTG CGCGACAGCT ATGACGTGCT GGTTGCGGAA
GAAAGCGACA AGCTCCTCGA CCAGGAGCAG CTCACCCAGG AAGCGATCCG TTCGGTCGAG
AACAATGGCA TCGTCTTTCT CGACGAGATT GACAAGATCT GCGCCCGCGC GGAGCGGCAG
GGCGGCGATG TCAGCCGCGA AGGCGTGCAG CGCGACCTGC TGCCGCTGAT CGAAGGAACG
ACGGTCGCGA CCAAGCATGG CGCGGTGAAG ACCGATCACA TTCTCTTCAT AGCGTCAGGC
GCGTTTCACA TTGCCAAGCC CTCCGATCTG TTGCCGGAAC TGCAGGGCCG TCTTCCGATC
CGCGTCGAAT TGCAGGCGCT CAGCAAGGAC GACATGCGCC GTGTGCTCAC CGAACCGGAA
GCGAGCCTCA TCAAGCAATA TGTCGCGCTT CTGAACACGG AAAACGTGAC GCTGGATTTC
ACCGATGACG GGATCGACGC CATTGCAGAC ATTGCCACCT CCGTCAATTC GACGGTCGAG
AATATCGGCG CGCGCCGGCT CCATACGGTG ATGGAACGCG TTCTCGACGA GGTGAGCTTC
GCCGCCACCG ACAAGGCGGG CGAGACGGTA ACGATCGACG GCGCCTATGT GCGCAAGCAT
CTCGGCGACC TGTCGAAGAA CACCGACCTG TCGAAATTCA TTCTCTAG
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| Protein sequence | MTSFSPREIV SELDRYIVGQ RDAKRAVAIA LRNRWRRQQL PDALRDEVLP KNILMIGPTG
VGKTEISRRL AKLAEAPFLK VEATKFTEVG YVGRDVEQII RDLVEIALAM TRERKRKDVQ
AKAHVAAEGR VLDALVGANA SEATRESFRR KLRDGELDEK EIEVEVADSG GGMPTFDIPG
MPGSQMGMIN LSDIMGKAFG GRTKTRRMAV RDSYDVLVAE ESDKLLDQEQ LTQEAIRSVE
NNGIVFLDEI DKICARAERQ GGDVSREGVQ RDLLPLIEGT TVATKHGAVK TDHILFIASG
AFHIAKPSDL LPELQGRLPI RVELQALSKD DMRRVLTEPE ASLIKQYVAL LNTENVTLDF
TDDGIDAIAD IATSVNSTVE NIGARRLHTV MERVLDEVSF AATDKAGETV TIDGAYVRKH
LGDLSKNTDL SKFIL
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