Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1233 |
Symbol | |
ID | 5454523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1369171 |
End bp | 1369932 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640876803 |
Product | imidazoleglycerol phosphate synthase, cyclase subunit |
Protein accession | YP_001412510 |
Protein GI | 154251686 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.686309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTTGA AGGCTCGCCT CATTCCCTGT CTCGACGTGA AGGATGGCCG CGTCGTCAAA GGCGTGAACT TTGTCGATCT GCGCGACGCG GGAGATCCTG TCGAAGCCGC GCGCGCCTAT GACGCGGCGG GTGCGGACGA ACTCTGTTTC CTCGACATCA CGGCGAGCCA CGAAGAACGC GCGATCATCT TCGATGTCGT CCGCCGCACG GCGGAGCAGT GCTTCATGCC GCTTACCGTC GGCGGCGGCG TTCGCACCAT CGAGGATGTG CGCCAGCTTC TGCTTGCCGG TGCCGACAAG GTCTCGATCA TGACGGCCGC CGTCTTCAAC CCCGATTTCG TGAAGGCGGC TGCGGAAAAA TTCGGCAATC AATGCATCGT GGTCGCCATC GATGCAAAGC AGACCGGCCC CGGCAAATGG GAAATCTTCA CCCATGGCGG GCGCAAGCCG ACCGGCATCG ACGCGGTTGA ATATGCCGTT AAGGTCTGCG AGCTGGGCGC GGGCGAAATC CTGCTCACCT CAATGGATCG GGACGGCGCG AAATCCGGCT TCGACATTGC CCTGACCCGC GCGGTGGCCG ATGCCGTTCC CGTGCCCGTT ATCGCCTCGG GCGGCGTCGG CACGCTCGAC CATCTCGTCG AAGGCATTCG CGACGGCCAT GCGAGCGCTG TCCTCGCGGC CTCGATTTTC CATTTTGGCG AGTTCACGAT CGGCGAAGCC AAGGCGCATA TGGCGGAAGC AGGTCTTCCC ATCCGCCTCT GA
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Protein sequence | MTLKARLIPC LDVKDGRVVK GVNFVDLRDA GDPVEAARAY DAAGADELCF LDITASHEER AIIFDVVRRT AEQCFMPLTV GGGVRTIEDV RQLLLAGADK VSIMTAAVFN PDFVKAAAEK FGNQCIVVAI DAKQTGPGKW EIFTHGGRKP TGIDAVEYAV KVCELGAGEI LLTSMDRDGA KSGFDIALTR AVADAVPVPV IASGGVGTLD HLVEGIRDGH ASAVLAASIF HFGEFTIGEA KAHMAEAGLP IRL
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