| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1214 |
|---|
| Symbol | |
|---|
| ID | 5453710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1345022 |
|---|
| End bp | 1345444 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640876784 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_001412491 |
|---|
| Protein GI | 154251667 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTCC TCGACACCAA TGTCGTATCG GAGGCGATGA AGCCCGCTCC CGACGAGGCC
GTGCGCGCAT GGCTCGACGA GCAGGCGGCG GAAACACTCT TTCTCTCCAG CGTCACCATC
GCCGAACTGA TGTTCGGCAT CGGCGCGCTC CCCGACGGCA AGCGCAAGGA GCGTCTCACC
GAAGCCCTGG ATGGGGTGAT GGAACTGTTC GCAGACCGCG TCCTCCCGTT CGATGTCGAT
GCTGCGCGCC GCTATGCGGA TCTCGCCGTC AAAGCCCGAG CGGCCGGGAA AGGCTTCCCT
ACTCCCGACG GCTACATCGC GGCGATTGCA GCCGCCAAGG GGTTTGCCGT CGCCACGCGC
GACAGCAGCG CATTCGAGGC CGCGAATGTC ACGGTGATCG ATCCCTGGAA GGCCGGGCGC
TGA
|
|---|
| Protein sequence | MILLDTNVVS EAMKPAPDEA VRAWLDEQAA ETLFLSSVTI AELMFGIGAL PDGKRKERLT
EALDGVMELF ADRVLPFDVD AARRYADLAV KARAAGKGFP TPDGYIAAIA AAKGFAVATR
DSSAFEAANV TVIDPWKAGR
|
|---|
| |