| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1180 |
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| Symbol | |
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| ID | 5454529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1316689 |
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| End bp | 1320429 |
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| Gene Length | 3741 bp |
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| Protein Length | 1246 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876751 |
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| Product | hypothetical protein |
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| Protein accession | YP_001412458 |
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| Protein GI | 154251634 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0863857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTACA AAGATCTTAT TCAATTCGAG CAAATCGAGT CGGTCGTTCA ACTGCTCGAC
GCCGACCGTC CCAACGAAGC CAAGAAGCTC GTCTCGACGT TTGTCATCTC CGATGACATG
GCCGAGCGCA TTGCCAAGCT CATGGTGCCG CAGCTCGGCT TCGACGAATC TGTCGATCAC
AAGGGTGTGC TCATCGTCGG CAACTACGGC ACCGGTAAAT CGCACCTGAT GTCGGTGCTA
TCGCTGGTGG CCGAAGACGC CGCCTATGCG CCGATGATCC GACACCCCAA AGTGGTGGAT
GCGGTCGCGT CCATCGCGGG GCGCTTCAAG GTGCTGCGCA TCGAGGTCGG CGGTCTTGAA
ATGCCGTTGC GCCAGATCAT CACCCAGCAG ATCGAACGAT TCCTCAAGAA ACTCGGCGTC
GATTTCACGT TCCCAAGCGC TGATCAGGAA CTGAACAACA AGGACTCCTT CGAGGAGATG
ATGGCTGCGT TCGGCGAGAA GTTCCCGGAT CAGGGGCTTT TGCTCGTAGT GGACGAGTTC
CTCGAATATC TGCAATCGCG TCGCGATCAC GAACTGGTGC TCGACCTAGC CATCCTGCGT
CAGATCGGCG AAGTCGCCAA GCATTTGAAA TTCCGCTTCG TTGCGGGTGT GCAGGAAGCC
ATCTTCGATA GCGGAAGGTT CCAGCACGTG GCCGACAGCA TACGCCGCGT CAATGAACGC
TTCACGCAAA TCCTGATCGA CCGCCAGGAC GTGAGCTTCG TCGTATCCGC GCGTCTGCTC
AAGAAGTCTG CCGACCAGCA GAATAAAATT CGCGAATATC TGAAGCCATT CGCCAAGTTC
TACGGATCGA TGAACGAGCG TATGGACGAG TATGTCCGGC TATTTCCGGT CCACCCAGAC
TATCTCAAGA CCTTCGAGCA GATTCACTTC ACCGAAAAAC GTGGCGCACT CAAGACCATC
GAAGCCGCAA TGCAGGCCAT TCTCGATCAG GATGTACCAA CTGATCGGCC ACAACTCATC
GCCTACGAAA GCTTCTGGAA TACGGTCAAG AGCAACCAGG TGCTGCGCGC CGATCCCAAC
ATCAAGGAGG TCTTGCGCGT CTCTGAAGTG CTGGAATCTC GCATCCAGCA GGCATTCACG
CGGCCGACCT ACAAACCGAT GGCGCTGCGC GTCGTCAACG GCCTGGCTGT GCATCGCCTG
ACCACCGGCG GCGACATCCA CATCCCGATT GGTCCTACCG CCGCAGAGCT TCGCGATTCC
CTGTGCCTGT TCCAACCTGG TGTCGGGGAT ATGCCCGGCG AACCGGCCGA GAACCTGCTG
TCGATGGTTC AGACCGTGAT GCGCGAGGTG CTGAAGACCG TCAACGGCCA GTTCATCTCC
AAGGCCGCCG ACACCGAGCA GTATTACCTC GATCTCAAAA AAGACGTCGA CTACGACGCC
CAGATCGATA AGCGCGCCGA AGCATTGTCA GACGACGCTC TGGACCGCGC CTACTATAGC
GCCGTCAAGA CGTTGATGGA GTGCAGCGAC GATCTTCGCT ACCCCGGCTT CCAGATCTGG
CAATACCAGA TCGAATGGCA GGAACACCGC GTCGAACGCC TGGGCTATTT GTTCTTCGGA
GGCCCAAACG ACCGTCCCAC CGCGCAGCCC GAGCGTGATT TCTACATCTA CTTCATTCAG
CCCTTCGACA AGGGACAGCG CACCTACTCG CAGCAGCCGG ATGAAGTGTT CTTTCGCTTG
AAAGCGCTTG ACGAGGGCTA CAGGCGCCAT CTGTCCCAAT ACGCTGCCTC GCTCGACCTG
GGCTCCACTG CCAGTGGCGG TGCGAAGGCG GTCTATCAGT CCAAGGCGCA GGACGCCCTG
CGCGCCATGA GCAAGTGGCT GCAAGAAAAG CAGCTGACCG CGTTTGAAGT CACCTATCAG
GGCAAGGCCA AGACGCTGCA AGACTGGGCC AAAGGTGTCT CACTGCGCGA CCGCGCGCGC
CTGGGGCCTG AGGAGAGGAT CAACTTCCGC GACATTGTGA ACATCGTCTC GGGCCTGGTT
TTGTCCCAGC ACTTCGCCGA CATCGCGCCC GAATATCCCA AGTTCCCGGT GCTCGTCACC
GAGGCTAACC GCAAATCCCT GATTGCCAGT ACGCTGCGCG CGCTGGCGGG CGGCACGCGC
ACCAAGGACG CTACCGCGGT CCTCGATGCC TTGGAAATGC TCGACGGCGA ACGTATCGAC
CCGGCGAGCT CCCGCTACGC TCAGGAAGTG TTGAACCGTC TCAAGGCCAA GGGCCATGGG
CAGGTGCTCA ACCGCAACGA ACTCGTCGCC GGTGCGACCG ATGTGGAGTA TTTCTCCCCG
GCCAAGCACC GGCTTGAGCC CGATCTGCTG GTCGTTGTGC TGGGCGCACT GGCCTATTCC
GGCGACATCG TGCTCGCGAT CACCGGCGAC AAGATCGACT CCGGCAAGCT CTCCTTGCTG
GCAGAACGCT CGCTCGATGA ACTCAAGCAG TTCAAGCACA TCGAGGCGCC CAAGGAAATC
AACCTCGCGG TGCTGCGTGC GCTGTTCGAG TTGCTCGATC TGCCATCTGG CCTGGCCCAG
AAGGCCAGCC AAGGCGACAC CGAACCGGTC ATCGCATTGC AGGAAAAGAT CAGCGCCCTG
GTGCCGCGTG TGCTCAGGGC GGGCTCCGAT CTCCAGCAGG GCAAGCTCGC CTTCTGGGGC
CAGAACCTGC TGCGCGAGGA AGAAGCCAAG GATTGGTACG CGCGGCTGGA TGCGCTCAAG
AAATTTACAG AATCCCTGTC TCCCTACAAC ACCGTCGGCA AGCTCAAAAA CCTGCGCACC
ACGCAGGAAG ACATCGACAT CCAGAAGAAA AATCTGGACG TGCTCGCCGG CGTCGAGCGT
TTGTTGGAAC TGATCGGAGA ATTGGGGGGC GCCGCATCCT ATCTGTCGCA GGCGGAGATG
ATCTTGCAGC CCGGCCACGA CTGGGTGAAG CAGGCCGAAG CCGCGCGCAA AGCCCTGTTC
GATAAGCTGG CGGAGGATCG CACAGCGGAA CGCGCCGCCG CCATCCTCGG CGAAGGCCGT
CAGACTCTCG CCGGGCTCAA GAAGGATTAC GTCACCGCCT ATATCGCCAG CCACAGCAAA
GCGCGGCTCG GCGTCGCCGA AGAGAAGACA CGCAATGCAC TGCGCCGCGA CGACCGCTTG
TTATCGTTGC GCGTGCTGGC AGGCGTCTCG CTGATGCCCA CCAGTCAGCT CACCGGCTTC
GAGGACGCGC TCAACGGCCT GAAAAGCTGC TCCGCGCTGG ACGAGCCGAC GCTGCTCAGA
ACGCCGGTAT GCCCCCACTG CCAGTTCCGG CCATCCGCCG AACAACTGGA ACTGCTGCCT
GCCGCCAGTC GCCTGAACAA GCTGGACGAC GATCTGGACC AGTTGCAGGC CAACTGGCAG
CAGACATTGC TGGAGAATCT GGAAGACCCG TTCACGCAGG ACAGCCTGGG CCTGCTGCCG
GCCGCATCGA AGGCTCTGAT CGATGCCTTC CTCGCCGCGC GCAAGCTGCC GGAGCCTGTC
ACCACCGATT TCGCCAACGC CGTGCAGGAA GCACTGTCCG GGCTGGAGAA GATCACGGTC
AAAGCAGACG AACTGCGTCA AGCCCTGCTG CAAGGAGGCT CGCCCGCCAC GCCGGATGAA
CTGCGCAAGC GGTTCGACGC GCTCATCAGC GAGCGGGGCA AGGGCAAGGA CGCAACCAAA
CTCCGGTTCG TGATCGAGTG A
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| Protein sequence | MKYKDLIQFE QIESVVQLLD ADRPNEAKKL VSTFVISDDM AERIAKLMVP QLGFDESVDH
KGVLIVGNYG TGKSHLMSVL SLVAEDAAYA PMIRHPKVVD AVASIAGRFK VLRIEVGGLE
MPLRQIITQQ IERFLKKLGV DFTFPSADQE LNNKDSFEEM MAAFGEKFPD QGLLLVVDEF
LEYLQSRRDH ELVLDLAILR QIGEVAKHLK FRFVAGVQEA IFDSGRFQHV ADSIRRVNER
FTQILIDRQD VSFVVSARLL KKSADQQNKI REYLKPFAKF YGSMNERMDE YVRLFPVHPD
YLKTFEQIHF TEKRGALKTI EAAMQAILDQ DVPTDRPQLI AYESFWNTVK SNQVLRADPN
IKEVLRVSEV LESRIQQAFT RPTYKPMALR VVNGLAVHRL TTGGDIHIPI GPTAAELRDS
LCLFQPGVGD MPGEPAENLL SMVQTVMREV LKTVNGQFIS KAADTEQYYL DLKKDVDYDA
QIDKRAEALS DDALDRAYYS AVKTLMECSD DLRYPGFQIW QYQIEWQEHR VERLGYLFFG
GPNDRPTAQP ERDFYIYFIQ PFDKGQRTYS QQPDEVFFRL KALDEGYRRH LSQYAASLDL
GSTASGGAKA VYQSKAQDAL RAMSKWLQEK QLTAFEVTYQ GKAKTLQDWA KGVSLRDRAR
LGPEERINFR DIVNIVSGLV LSQHFADIAP EYPKFPVLVT EANRKSLIAS TLRALAGGTR
TKDATAVLDA LEMLDGERID PASSRYAQEV LNRLKAKGHG QVLNRNELVA GATDVEYFSP
AKHRLEPDLL VVVLGALAYS GDIVLAITGD KIDSGKLSLL AERSLDELKQ FKHIEAPKEI
NLAVLRALFE LLDLPSGLAQ KASQGDTEPV IALQEKISAL VPRVLRAGSD LQQGKLAFWG
QNLLREEEAK DWYARLDALK KFTESLSPYN TVGKLKNLRT TQEDIDIQKK NLDVLAGVER
LLELIGELGG AASYLSQAEM ILQPGHDWVK QAEAARKALF DKLAEDRTAE RAAAILGEGR
QTLAGLKKDY VTAYIASHSK ARLGVAEEKT RNALRRDDRL LSLRVLAGVS LMPTSQLTGF
EDALNGLKSC SALDEPTLLR TPVCPHCQFR PSAEQLELLP AASRLNKLDD DLDQLQANWQ
QTLLENLEDP FTQDSLGLLP AASKALIDAF LAARKLPEPV TTDFANAVQE ALSGLEKITV
KADELRQALL QGGSPATPDE LRKRFDALIS ERGKGKDATK LRFVIE
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