| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1173 |
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| Symbol | |
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| ID | 5454483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1304123 |
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| End bp | 1304407 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876744 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_001412451 |
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| Protein GI | 154251627 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.436282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCAGC CAGCCCGAGC AATCGCGAAA CGTACGATCC GACGGCATGA ACTTCGGGAA
ATCGTACCTC TCGCCGACAC AACGATCTAT GACATGGAAC AGCGCGGCGA ATTTCCTCAG
CGCTTCTACC TCACCTCCCG CTGCGTGGTT TGGGATCTTG GAGAGGTCGA AGCCTGGCTC
GATGACCGGC GCCGGGCTTC ACGAGCCAAG GCCGTGAAGC GTGCACCTGT TCCCGACGTA
CAGCTCCGCA AGACGCGGCC TGTCAGGCAT CAAACTCGGG CGTAA
|
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| Protein sequence | MAQPARAIAK RTIRRHELRE IVPLADTTIY DMEQRGEFPQ RFYLTSRCVV WDLGEVEAWL
DDRRRASRAK AVKRAPVPDV QLRKTRPVRH QTRA
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