Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1162 |
Symbol | |
ID | 5455007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1289978 |
End bp | 1290421 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640876732 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_001412440 |
Protein GI | 154251616 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCTGA TCTTTGTGAT GATTGGCATC CTGCTTTACG CCTCCATCTC CCGAACCATG TTCAACATGC CCATCAGCTG GGCGATGGAG ATGGGGCAGT TTCTCCTGGC TGCCTATTAC TTGCTCGGCG GTGGTTACTC CCTCCAGATC AATTCGCATG TGCGGATGGA CCTGCTCTAT GGCCGTCTCT CGCCACGGAA AATGGCATTC ACCGACACGA TCACCGCCTT CTTTCTGATT TTCTACCTGT GCGTTCTGCT CTATGGCGGC ATTTCCAGTA CCGCGTATGC GGTCACATAT CAGCAGGTGA ACTATACATC CTGGGCGCCC TTGCTTTGGC CGATCAAGAG CATCATGACG GTAGGCATTG CGCTGATGCT GCTTCAGGCC ATAGCTATTT TCTTCAGAGA TCTCGCCCGC GTCCGAGGTG AGGAAATCGC ATGA
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Protein sequence | MYLIFVMIGI LLYASISRTM FNMPISWAME MGQFLLAAYY LLGGGYSLQI NSHVRMDLLY GRLSPRKMAF TDTITAFFLI FYLCVLLYGG ISSTAYAVTY QQVNYTSWAP LLWPIKSIMT VGIALMLLQA IAIFFRDLAR VRGEEIA
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