| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1143 |
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| Symbol | |
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| ID | 5456283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1260326 |
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| End bp | 1261720 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876713 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001412421 |
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| Protein GI | 154251597 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC GATCTGCCGC CAATTCGCGT GGCTACAAGA AGGTCATGCG CAGCCTTGAC
CTCACGCTGT TCACTGTCTG CGCCATTCTC GTTATCGACC AGTTAGCGGC TTCCGCGGCC
ATCGGCCCGC AAGCTGTCTT CTGGTGGATA TTCACGATGA TCTTCTTCTT CTTGCCCTAT
GGCCTCATCA CCGCCGAACT CGGCAGCACC TATCCGGACC AGGGTGGCAT CTATGCCTGG
GTGCGCCGCG CTTTCGGGCC GCGTTGGGGC GGACGTACAG CCTGGCTCTG GTGGATCAAC
GTCGCGCTCT GGCAGCCCTC GGTCTTCATT CTCTTCGCCG GCATCTTCGC CGCCCTCTTC
ATGCCGGACC TCGGTCTGTG GACGCAGATC GCCATCGCCA TTGCGCTCAC CTGGCTCACC
GTCTGGATCA ACGTCGTCCG TCTCGACGTC GGCAAATGGG TGCCCAATAT CGGCGCCGTC
TTCAAGGCCG CGATCATGCT GGTCATCGGC ATTGGCGGTT TTCTCTACGC CGCAAATCAC
GGTGTCGCCA ACGAGCTGAC ATTCTCCAGC ATGGCGCCGA GCTGGGGTGC CTCGCTCGCC
TTCCTGCCGG TCATCGTCTA CAACTTCATG GGCTTTGAGC TGATGTCCGG CGCCAGCGCC
GAGATGAAAA ACCCCGCCCG CGACGTGCCC GTGACGATCG CCGTATCGGG TATTCTCATC
GCCGCCTTCT ATCTCTTCGC CACCATCGGC ATCCTGATCG CTCTCCCGCT CGACGAGATC
AACCTCGTCA GCGGCATCGT CGATACGCTC CGCGTGTTGC TCGGCGAAGG GGGTGGCATA
TTCGTCGTCG TGCTCGGTAT CATGGCGCTC TACACCTTCC TTGCCAACAT GGTCACATGG
ACCATGGGTG CCAACCGCTC GGCCGCCGAG GCCGCTCTCG ACGGCAACCT GCCGGCGATG
TTCGCGCGCC TTCACCCTGA GCATAAAACG CCTTCCAACG CTGCCATCGT GACGGGCGTT
GTGACCTCGG TTGTCATCGT CGTCTACGGT CTCCTCGCCG CCGACGCGGA AGACCTCTTC
TGGACGCTCT TCGCATTCTC CTCCATCGTC TTCCTGCTTC CTTATCTCAT CATGTTCCTG
ACCTTCCTGC AGCTTCGCCG CATCGATGCG CACCGGCCGC GCCCCTATCG GGTGCCCGGC
GGAAAGGGCG GGGCCCTCGT TTTCGCTTTG TTGTGCATCG CGTTCATCGT TCAGGCCATT
GTCTTCTTCA TCTACACTCC CGGGGAGTTC GACATGACAT ATGCCGCCTC CATCATCATC
GGCGTCGCGG CAACGGTCAT CGTCGGTGAA CTCATGATCA TGCGGGCAAA GCGCGTCACC
GCGTCTGCAG GCTGA
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| Protein sequence | MTDRSAANSR GYKKVMRSLD LTLFTVCAIL VIDQLAASAA IGPQAVFWWI FTMIFFFLPY
GLITAELGST YPDQGGIYAW VRRAFGPRWG GRTAWLWWIN VALWQPSVFI LFAGIFAALF
MPDLGLWTQI AIAIALTWLT VWINVVRLDV GKWVPNIGAV FKAAIMLVIG IGGFLYAANH
GVANELTFSS MAPSWGASLA FLPVIVYNFM GFELMSGASA EMKNPARDVP VTIAVSGILI
AAFYLFATIG ILIALPLDEI NLVSGIVDTL RVLLGEGGGI FVVVLGIMAL YTFLANMVTW
TMGANRSAAE AALDGNLPAM FARLHPEHKT PSNAAIVTGV VTSVVIVVYG LLAADAEDLF
WTLFAFSSIV FLLPYLIMFL TFLQLRRIDA HRPRPYRVPG GKGGALVFAL LCIAFIVQAI
VFFIYTPGEF DMTYAASIII GVAATVIVGE LMIMRAKRVT ASAG
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