Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1114 |
Symbol | |
ID | 5454662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1224767 |
End bp | 1225444 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640876684 |
Product | phosphatidylserine decarboxylase related protein |
Protein accession | YP_001412392 |
Protein GI | 154251568 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAGCC TTACTTCGAT TTTGACGCCT ATTCACAGGG AAGGGCACCG CTTCGCGATT ATCTTCGCCG CGGTCACCAT CGTCCTTTTC CTGATCTGGA ATCCCCTGGG CTGGATCGGC GTCATTCTGA CGCTCTGGTG CCTTTATTTT TTCCGCGATC CGGACCGCGT TACCCCCACG CGCGAAGGCC TGGTGGTCAG CCCGGCCGAC GGCATCGTGA ACCTCATCAC GGAAGCCTCG CCGCCCGAAG AACTGGGATT GGGCGATATG GTCCGCACGC GCGTTAGTAT CTTCATGAAC GTGTTCAACT GTCATGTGAA CCGCGCGCCT GTCGCCGGGA CGGTGAAGCG GGTCGCCTAC CGACCGGGCC TGTTTCTGAA TGCCGACCTC GATAAGGCCA GCGATGCGAA TGAACGGAAC TCGCTTCTGA TCGAGCGGGC CGATGGCGAG CAGATCGTGG TTGTCCAGAT CGCGGGGCTT GTCGCCCGGC GTATCGTTTG CGACGTGAGA GAGGGGCATG ACCTCGCGGC GGGTGAGCGC TTCGGCATCA TTCGTTTTGG TAGCCGCCTC GATGTCTATC TGCCGGTCGG CGCCATACCG CTCGTCGCCG TCGGGCAGAC GGCGATTGCC GGTGAAACCG TGCTGGCGGA TTCGATATCC GTCTTGCCGC AAGTGTAA
|
Protein sequence | MDSLTSILTP IHREGHRFAI IFAAVTIVLF LIWNPLGWIG VILTLWCLYF FRDPDRVTPT REGLVVSPAD GIVNLITEAS PPEELGLGDM VRTRVSIFMN VFNCHVNRAP VAGTVKRVAY RPGLFLNADL DKASDANERN SLLIERADGE QIVVVQIAGL VARRIVCDVR EGHDLAAGER FGIIRFGSRL DVYLPVGAIP LVAVGQTAIA GETVLADSIS VLPQV
|
| |