| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1096 |
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| Symbol | |
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| ID | 5456690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1201654 |
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| End bp | 1203048 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876666 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001412374 |
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| Protein GI | 154251550 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.966899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATA CCTGGAAACC GGAGAGCTGG CGCGCCAAAC CCGCGAAGCA TCTCCCGAGC
TACCCGGATG AAGCGGCTCT GGCCGCCGTG GAAGCGCGCC TGCGCTCCTA TCCGCCGCTC
GTTTTTGCAG GTGAGGCCCG CAAGCTGAAG GCCGACCTCG CCGAGGTCTG CGAGGGCCGT
GCATTCCTCC TCCAGGGCGG TGATTGCGCC GAAAGCTTCG CCGAATTCTC CGCCGACAAT
ATCCGCGACA CCTTCCGCGT GCTGCTGCAG ATGGCGGTTG TGCTCACCTT CGCCGCCGCC
TCGCCGGTCG TGAAGGTCGG CCGCATCGCC GGCCAGTTCG CGAAGCCGCG TTCGTCCGCC
ACCGAAACCA TCGGCGACGT GACGCTGCCG TCCTATCTCG GCGACAACAT CAACGGTATC
GAGTTCGACG AGAAATCGCG CGTGCCCGAT CCCGAAAGGC TGCTCCGCGC CTATTCGCAA
TCGGCCTCGA CGCTGAATCT CATTCGCGCC TTCGCGAATG GCGGCTATGC CGATCTCGAT
TTCGTGCATC GCTGGAATCT GGGCTTCGTC TCCGACAGCG CCGAAGGTGC GCGCTACGAG
GAACTGGCGA ACCGCATCAC GGAAGCGCTC GATTTCATGC GCGCCTGTGG CATCGACAGC
GCCACGCAGC CCCAGCTTCA CACGACGGAT TTCTACACCA GCCACGAGGC CCTGCTGCTC
GGCTACGAAC AGGCGATGAC GCGCATCGAC AGCACGACGG GCGATTGGTA CGACACCTCC
GCCCACATGC TCTGGATCGG CGACCGCACG CGCCAGCCCG ATCACGGCCA TGTCGAATAC
ATGCGTGGCA TCAAGAACCC GATCGGCATG AAATGCGGCC CCTCCCTCGA TCCCGAGGAG
CTTGTGCGTC TCACCGACAT TCTCAATCCG AAGAACGAGC CGGGCCGCTT GACGCTCATC
TGCCGCTTCG GCGCCGAGAA TGTCGAGAAG CACCTGCCGC AGCTCATCCG CGCCATCGAG
CGCGAGGGCA AGAAGGTGGT CTGGTCCTGC GACCCGATGC ACGGCAACAC CATCAAGGCG
TCGTCCGGCT ACAAGACGCG GCCCGTGGAC CGCATCCTCG CCGAAGTACA GGCCTTCATG
GCCGTGCACC GCGCCGAAGG CACCCATGCC GGCGGCGTCC ATTTCGAAAT GACCGGCCAG
AACGTCACCG AATGCATCGG CGGCGCGCAG GCGATTTCGG AAACGCAACT CGGCGACCGC
TACCACACGC ATTGCGACCC GCGCCTCAAC GCCAGCCAGT CGCTGGAACT CGCCTTCCTC
ATCGCGGAAG GCCTGAAGAA GGAGCGCCTG GAAGCCCTGC GCGCCGAACC CGTCGCCGCC
CTCGGCGCCT GGTAA
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| Protein sequence | MADTWKPESW RAKPAKHLPS YPDEAALAAV EARLRSYPPL VFAGEARKLK ADLAEVCEGR
AFLLQGGDCA ESFAEFSADN IRDTFRVLLQ MAVVLTFAAA SPVVKVGRIA GQFAKPRSSA
TETIGDVTLP SYLGDNINGI EFDEKSRVPD PERLLRAYSQ SASTLNLIRA FANGGYADLD
FVHRWNLGFV SDSAEGARYE ELANRITEAL DFMRACGIDS ATQPQLHTTD FYTSHEALLL
GYEQAMTRID STTGDWYDTS AHMLWIGDRT RQPDHGHVEY MRGIKNPIGM KCGPSLDPEE
LVRLTDILNP KNEPGRLTLI CRFGAENVEK HLPQLIRAIE REGKKVVWSC DPMHGNTIKA
SSGYKTRPVD RILAEVQAFM AVHRAEGTHA GGVHFEMTGQ NVTECIGGAQ AISETQLGDR
YHTHCDPRLN ASQSLELAFL IAEGLKKERL EALRAEPVAA LGAW
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