| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1061 |
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| Symbol | |
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| ID | 5456505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1165624 |
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| End bp | 1166754 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876631 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001412340 |
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| Protein GI | 154251516 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03203] pimeloyl-CoA dehydrogenase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTT CGTTCACCGA AGAGCAGACG CTGCTCCGCA ATACCGTGCA GAGCCTGCTC
GCCGACAAAT ATGATTTCGA TACGCGCCGC AAGGTCGTGA AGACGGCCGA GGGCTGGCGT
CCCGAGATGT GGGCGCAGTT CGCCGAGCTC GGCCTCCTCG CCGCGCCTTT CTCGGAAGAG
CTGGGCGGTC TTGGCGGCGG CGCCATCGAA AACATGATCA TCATGGAAGA GTTCGGCCGC
CACCTCGTGG TCGAGCCCTA TCTCGAAACG GTCGTCATCG CCGGCGGCTT CCTGCGTGAA
GGCGGCTCCA AGGAACAGCA GGAAGCGTTG ATCCCCGGCA TCATCGGCGG CGAAACGGTC
TGGGCCTTCG CCTATGCCGA ACCGCAGGGC CGCTACAACC TCGCGGACCT GACGACGACC
GCGAAGAAGG ACGGCTCGGG CTACACGATC AACGGCTACA AGGCCGTGGT CCTCGGCGCA
CCCTGGGCGC AGAAGCTGAT CGTGACCGCG CGCACCTCCG GCGCCCAGCG CGACCGCGAC
GGCATTTCCG TCTTCATCGT CGACAAGTCG GCGGCGGGCG TTTCCACCCG TGACTACCCG
ACGGTCGATG GCCGCCGCGC CTCGGAAATC ACCTTCGAAA ACGTGAAGGT CGGTGCGGAT
GCGCTGATCG GCACGGAAGG CAAGGGTCTG CCGCTCATCG AGAAGATCAC CGACGAGGCG
ATCGCCGCTC TCTCCGCGGA AGCGACCGGC TGCATGAAGG AACTGAACAC CGCCACCGTC
GAATATTGCA AGACGCGCAA GCAGTTCGGC GTACCCATCG GCAAGTTCCA GGTGCTCCAG
CACCGCATGG TCGACATGTT CATGGCCTAT GAGCAGTCCG TCTCCATGAC CTACATGGTC
AACCTCAAGC TCGGCGAAGG CGATGCCGAG CGCACCAAGG CTGCTGCCGG CGCCAAGGTG
CAGATCGGCA AGGCCGGCCG CTTCGTCGGC CAGCAGGCCG TGCAGCTTCA TGGCGGCATG
GGCATGACCG ACGAACTCAA TGTCGGCCAC TACTTCAAGC GCCTGACGAT GATCGACACG
CAGTTCGGCA ACGTCGATTA CCAGCTGAAG CGCTACTCCG AAGCCGCATA A
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| Protein sequence | MDFSFTEEQT LLRNTVQSLL ADKYDFDTRR KVVKTAEGWR PEMWAQFAEL GLLAAPFSEE
LGGLGGGAIE NMIIMEEFGR HLVVEPYLET VVIAGGFLRE GGSKEQQEAL IPGIIGGETV
WAFAYAEPQG RYNLADLTTT AKKDGSGYTI NGYKAVVLGA PWAQKLIVTA RTSGAQRDRD
GISVFIVDKS AAGVSTRDYP TVDGRRASEI TFENVKVGAD ALIGTEGKGL PLIEKITDEA
IAALSAEATG CMKELNTATV EYCKTRKQFG VPIGKFQVLQ HRMVDMFMAY EQSVSMTYMV
NLKLGEGDAE RTKAAAGAKV QIGKAGRFVG QQAVQLHGGM GMTDELNVGH YFKRLTMIDT
QFGNVDYQLK RYSEAA
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