Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1060 |
Symbol | |
ID | 5456433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1164392 |
End bp | 1165585 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640876630 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001412339 |
Protein GI | 154251515 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.596056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGA GCTTCTCACC GGAAGAACTT GCCTTCCGCG ACGAGGTTCG CGAGTTCATC GCGAACAATT ACCCGCAGGA ACTCAAAGGC GGCCGCCGCA CGCGCGGCGA GATGTCGAAG GAAGATATCC TCAAGTGGCA CCGCATCCTC TACAAGAAGG GATGGGTCGT GCCGCATTGG CCGGTTGAGT ATGGCGGCAC CGGCTGGACG ATCACCCAGC GCTACATCTG GAACGAAGAG AACGCGCGCG CCGAAACATC GCCGCTGCTG CCCTTCGGCC TCTCGATGGT CGGCCCCGTC ATCTACACCT TCGGCAATGA AGAGCAGAAG AAGCGCTTCC TGCCCGGCAT CCTCTCCGCC GACGATTGGT GGTGTCAGGG CTATTCGGAG CCGGGCTCCG GTTCCGACCT CGCCAGCCTT CGCACCAGGG CCGTCCGCGA GGGCGATCAC TACATCGTCA ATGGCGGCAA GACCTGGACG ACGCTCGCCC AGTTCGCCGA CTGGATGTTC TGCCTCGTCC GCACCGATCC GAACGCCAAG GCCCAGGAAG GCATCTCCTT CCTGCTGATC GACATGAAGA CCCCCGGCAT CACCGTGCGC CCCATCATCA CCATGGACGG CTCGCATGAA GTGAACGAGG TCTTCCTCGA AGACGTGAAG GTGCCGGTCG AAAACCTGAT CGGCGAGGAG AACAAGGGCT GGACCTATGC GAAGTTCCTG CTCGGCAACG AACGCTCCGG CATTGCCGGC GTCGCCCGCT CCAAAAAGGC CATCGAACGT TTGAAGAAGA TTGCCGATGC GGAACTGGTC GATGGCGAGC CGCTCATGAA GACGGATGAA TTCGCCCGCA AGGTCGCTGA ACTCGAGATC GATCTTTCGG CCCTCGAAGT CACCGAGCTG CGCACGCTGG CTGCCGAAAG CAAGGGCCGC GGCCCCGGCC CGGAAGCCTC GATCCTCAAG ATCAAGGGCA CGGAAATCCA GCAGCGCATC ACCGAGCTGA CAATGGAAGC CGTCGGCAAC TACGCTTTCG TCCAGGCACC GCGCATGGAA GTCACGGGCA ACGAATTCCT GCCCGGTCCG GATTACGCGC CGGGCGTCTC GCAGGACTAT TTCAACATGC GCAAGACGTC GATCTATGGC GGGTCGAACG AGATCCAGCA CAACATCATC GCAAAAATGG TGCTCGGCCT CTAA
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Protein sequence | MDMSFSPEEL AFRDEVREFI ANNYPQELKG GRRTRGEMSK EDILKWHRIL YKKGWVVPHW PVEYGGTGWT ITQRYIWNEE NARAETSPLL PFGLSMVGPV IYTFGNEEQK KRFLPGILSA DDWWCQGYSE PGSGSDLASL RTRAVREGDH YIVNGGKTWT TLAQFADWMF CLVRTDPNAK AQEGISFLLI DMKTPGITVR PIITMDGSHE VNEVFLEDVK VPVENLIGEE NKGWTYAKFL LGNERSGIAG VARSKKAIER LKKIADAELV DGEPLMKTDE FARKVAELEI DLSALEVTEL RTLAAESKGR GPGPEASILK IKGTEIQQRI TELTMEAVGN YAFVQAPRME VTGNEFLPGP DYAPGVSQDY FNMRKTSIYG GSNEIQHNII AKMVLGL
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