Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1025 |
Symbol | |
ID | 5456390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1124119 |
End bp | 1125615 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640876595 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001412304 |
Protein GI | 154251480 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGC TTTCGATATC GTCAATCATT CAGGCGCATG CCCGGCGAAA AGGTTCCGCA CCCGCCGTCA CCTATCCTGA CGGTGCGTTG ACCTGGAGCG AACTCGACAA ACGCTCAAAC CAGCGAGCTC GCCTGCTCGC CTCGCTGGGT GTCAAGCAAG ACAACCTTGT CGCAGTCATG CTGCCGAATG GCAGCGAGTT CCACGAAGCC GTGGTGGCTG TCTGGAAGGC GGGCGCGACA CCATGCATCC TGCCGTCCAA GCTTCCCGGC CGTGAAGCTA GCGACATTCT CGCGCTTGCG CGGCCGGCGG CGGTGATTGG CGACATATCG GCCGCTTTTA ATGGGGCTCG GATTGCTCGC GGCGCCGCCT TGGACCAGTT CAGCGATGCC CCCGTGGAAG ACGCCGGCGC CGCACATTGG AAAGCGGTTA CGAGCGGCGG CTCCAGCGGC CGGCCCAAGA TTATCCTCGA TAGCATGCCG GCGTTCATCG ACCCCGCCGC TCCACCCTAT GCTGGCGTTG GACTCCCAAC CGATGGGGCG ATGCTCAACC CCGGACCGCT CTACCACAAC ATGCCGTTCC TTTTTACCAG CTTCGGCCTG ATGACAGGTT CGCACGTCGT CGGCATGAGC CGCTTCGATG CCGAGGAATG CCTGCGACTG ATCGAGCGGC ACCGGATCGA GTTCATGGCG GTCGTGCCGA CGATGATGCA GCGGATATGG GCGCTGCCGG AAAGCATCCG CACATCCTAC GATATTTCCT CGATCAAAAC CGTCTGGCAC ATGGGGGCGC CTTGTCCGCA ATGGATCAAG CGCGCATGGA TAGATTGGCT CGGTCCCGAC AGGATTTTCG AGGCTTATGG TGGAACCGAA GCCGGAGGCT GCGCCATTAC CGGCCGCGAA TGGCTCGCTA AACCTGGCTC GGTCGGCAAG CCCGCTCCTG GAACCTTACG CATCCTTCGA GAGGATGGTA CGGAAGCAGA AATTGGTGAG ATCGGTGAAG TTCACTTCCC TGCTGCCGCG AGCGGCAAGT TCCGATACAT CGGAGCGGAA TCAAAAAAGG ATGCATCGGG CGGCTACTCG ATCGGCGATC TCGGGCATAT CGATGAGGAC GGCTATCTTT TCCTGGCGGA TCGTAGATCC GATCTAATTC TGCGGGGAGG CGCGAACATA TATCCAGCCG AGGTCGAGGC CGTGCTGGAC GAGCATCCGC TCGTTTCATC CTCGGCCGTG ATTGGTTTAC CGGGCGGAGA TCTGGGTGAG CGGGTTCATG CCATCATCCA GTTGCACGAA GGTCGACAAC TCGACCTGGC ATCTATCGTC GCGCATGTTG GCGAGAAGCT GTCCAAATAC AAGCATCCGG CATCCTACGA ACTGAGTGTT GCACCGCTGA GGGACGACGC CGGAAAGGTT CGTCGATCCC GTTTGAAAGA AGAGCGACTG GTGTGGCTTG AGGAAGGGCG GGCGTTTGAG TTGGCGCCTG ACCTCGGGGA GAAATGA
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Protein sequence | MSKLSISSII QAHARRKGSA PAVTYPDGAL TWSELDKRSN QRARLLASLG VKQDNLVAVM LPNGSEFHEA VVAVWKAGAT PCILPSKLPG REASDILALA RPAAVIGDIS AAFNGARIAR GAALDQFSDA PVEDAGAAHW KAVTSGGSSG RPKIILDSMP AFIDPAAPPY AGVGLPTDGA MLNPGPLYHN MPFLFTSFGL MTGSHVVGMS RFDAEECLRL IERHRIEFMA VVPTMMQRIW ALPESIRTSY DISSIKTVWH MGAPCPQWIK RAWIDWLGPD RIFEAYGGTE AGGCAITGRE WLAKPGSVGK PAPGTLRILR EDGTEAEIGE IGEVHFPAAA SGKFRYIGAE SKKDASGGYS IGDLGHIDED GYLFLADRRS DLILRGGANI YPAEVEAVLD EHPLVSSSAV IGLPGGDLGE RVHAIIQLHE GRQLDLASIV AHVGEKLSKY KHPASYELSV APLRDDAGKV RRSRLKEERL VWLEEGRAFE LAPDLGEK
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