| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0987 |
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| Symbol | |
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| ID | 5454763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1067761 |
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| End bp | 1068606 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876558 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001412267 |
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| Protein GI | 154251443 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.966352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAG AATCCCGGAA ATGGTGGATC ACGGGTGTGA GCAGCGGCCT GGGACAGGCG
ATTGCCACCG CAGCGCTGGC GCGGGGGGAC ATGGTTGCCG GCACGGTACG CCGAAAAGCG
GACCTCGAAG TCTTCGAAGC GCTGGCACCC GGCCGCGCCC TCGGTTTCCT CCTCGACGTG
ACGGACAGCG CCGCTGTTCG CAAAACGGCC GCCATCATCG AAGAACGCAC GGGCGGTATC
GACATCCTCG TCAACAATGC GGGATATGGC CTTATCGGTG CCATCGAGGA AGCGAGCGTA
GAGGAAATCC GCGCGCAGTT CGACGTCAAT GTCTTTGGCG CCGTCGGCGT CATCCAGGCC
GCCCTACCCT TTATGCGCAA GCGAAGAGCC GGACACATTC TCAATGTGAC ATCCGTAAGC
GGTCTCGCGC CGTGGATGGG GACGGGAATT TATGGCGCAA CCAAATACGC ACTCGAATGT
ATCGGTCAGA CCCTTGCAGA AGAGGTCCGT CCGCTCGGCA TCAAGGTCAC GAATGTCGCG
CCCGGCGGCT TGCGGACGGA CTTTGCAACG CGCTCGCTGG CGGTTTGCAA AACGGAAATC
GCGGATTATG AGCCAACCGC TCATCTCGCC CGCAACATTC TCTCGAGCCA TGGTGGCAAC
GAGGGAGGCG ACCCTGTAAA GGCTGCGCTC GCAGTGCTCA AGGTTGTCGA TGCGGAAGAG
CCTCCGCTCC ATCTCCTGCT CGGCGCCGAT GCGCTCCACT ATGTCGGGCG AAAGCTCGGC
GCCTTTCATG CGGAGATCGC GGACTGGGCG CCCGTTACGC TGTCGATCGG CTACGACGAA
AACTAG
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| Protein sequence | MPEESRKWWI TGVSSGLGQA IATAALARGD MVAGTVRRKA DLEVFEALAP GRALGFLLDV
TDSAAVRKTA AIIEERTGGI DILVNNAGYG LIGAIEEASV EEIRAQFDVN VFGAVGVIQA
ALPFMRKRRA GHILNVTSVS GLAPWMGTGI YGATKYALEC IGQTLAEEVR PLGIKVTNVA
PGGLRTDFAT RSLAVCKTEI ADYEPTAHLA RNILSSHGGN EGGDPVKAAL AVLKVVDAEE
PPLHLLLGAD ALHYVGRKLG AFHAEIADWA PVTLSIGYDE N
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