| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0956 |
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| Symbol | |
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| ID | 5454665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1030252 |
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| End bp | 1032054 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876527 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001412236 |
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| Protein GI | 154251412 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.818722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGC AGGAAGCGAC CGCGCGGCGG CACCGGTCGC TGCCCGCCGG GCTTTTGCCC
CGCCTCGTGC TCGGCCTTTC GGGCGTTGCG CTCTTCGCTC TCAATGTGGC GCTCTATTCG
GAGGAAGGCG GCTCGCGCAC GCTGCTTTTT TCCTCGCTGC TTTCGGGCGG CTATCTCGCG
CTTGCCTATA TGCTGGTCAG GCTTCGGGAG TCGAAGCTCG AGGCGGAAGC GGCGCTGGTG
GAGAACCAGC ATCGTTTCGA CATGGCGTTT GCGGGCGCGC GCTGCGGCAT CTGGGACTGG
GATCTCGGCG AGAACCGCAT CTACTGGTCG TCGGCCATGT TCGACATGGT GGGGCTGAAG
CAGCCTTCCA AGCGGCTGTC GCCGAACGAA ATCAAGGCGA TGGCGCATCC GGACGATGCC
GGCGCCATAG ACGAAATCGC CAATGCGGCG TCGCGCCCCT CGCGCTCCTA CGACACGGCT
TTCCGCCTGC GCCATGCGGA TGGAAGCTGG GTGTGGATGC ATGCCAAGGG ACAGGTCTGG
GGCGGCGGGC GCGCGGCGGG CGAAAGGCTC GTCGGCATCA CCATCGACAT TACCGACCAG
AAGATCGCCG AAGAGCGCGT GCACGAAGCG AATGAGCGGC TGCGCGACGC CATCGAAAGC
GTGGGCGAAG CCTTTGTGCT GTGGGACGCG GAGGGCAGGC TCGCGACAGC GAACAGCAAG
TTCGGCGAGT TCCTCAATCT CGGCGAGGAC TACATGCATC CCGGCGCACC GCGCGGCGAG
ATGATGCAGC GCGCGGGTGT GGGCGACGCC TGGCCGGTGT CGCAGGATGG CGGTGAAGCG
GGAGCGGGCG TCCATGAAAT CCGGCTGCCG ACGGGGCGCT GGCTGCAGAT CAGCGAGCGG
CGGACGAAGA GCGGCGGGCA TGTGAATGTC GGCACCGACA TCACGGCCAT CAAGGAACAG
GAAGCGGCGC TGACCGACAA CAAGGTGGCG CTGGAAAAGA CGGTGCGCGA CCTCGAAACC
TCGCGGCGGA AGCTGCAGGA ACAGGCGCGG CAGCTTGTGG ACCTTGCGGA GAAATACGCC
TCCGAGAAGA CGCGCGCGGA AGCGGCGAAC CGCTCGAAAT CGGAATTCCT GGCGAATATG
AGCCATGAGC TGCGGACGCC GCTGAACGCC ATTATCGGCT TTTCGGAAAT CATGGAGTCC
GGGCTTTTCG GCGAACTCGG ATCGCCGAAA TACAAGGAAT ATGCGGGCGA CATCCATGCG
AGCGGGACGC ATCTCCTCGA ACTCATCAAC GACATTCTCG ACATGTCGAA GATCGAGGCC
GGGCGGATGA CGCTTGAGAC GCAGCCGCTG GAACTTTCCG AAGTGGTGGA GGAATCGCTG
CGGCTGGTTT CCGGCCGCGC CGAGGTGGCG AAGGTGCATA TCGCCAACGA GATGGGGCCG
CTGCCGACCG TCGACGCCGA CAAGCGCGCG GTGAAGCAGG TGCTGCTGAA CCTGCTCTCA
AATGCCGTGA AATTCACGCC GGCGGGCGGC TCTATCCATC TGCGCGGCGA GACGAGCGGA
CGCTTCGTCA CGATCTCGGT CGAGGACACC GGCATCGGCA TTCCGGCCAG CGCGCTGCCG
AAGATCGGGC GGCCGTTCGA GCAGGTGGAA AGCCAGCATT CCAAATCGCA CAAGGGAACC
GGGCTTGGCC TGGCGCTGTC GCGCTCGCTC GTGGAGCTTC ACGGCGGCGC GCTCGTTCTC
GAGAGCACGG AAGGCGTGGG CACAAAGGTC AGCTTTACGC TGCCGCTGAC AGCGGAAGCC
TGA
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| Protein sequence | MKWQEATARR HRSLPAGLLP RLVLGLSGVA LFALNVALYS EEGGSRTLLF SSLLSGGYLA
LAYMLVRLRE SKLEAEAALV ENQHRFDMAF AGARCGIWDW DLGENRIYWS SAMFDMVGLK
QPSKRLSPNE IKAMAHPDDA GAIDEIANAA SRPSRSYDTA FRLRHADGSW VWMHAKGQVW
GGGRAAGERL VGITIDITDQ KIAEERVHEA NERLRDAIES VGEAFVLWDA EGRLATANSK
FGEFLNLGED YMHPGAPRGE MMQRAGVGDA WPVSQDGGEA GAGVHEIRLP TGRWLQISER
RTKSGGHVNV GTDITAIKEQ EAALTDNKVA LEKTVRDLET SRRKLQEQAR QLVDLAEKYA
SEKTRAEAAN RSKSEFLANM SHELRTPLNA IIGFSEIMES GLFGELGSPK YKEYAGDIHA
SGTHLLELIN DILDMSKIEA GRMTLETQPL ELSEVVEESL RLVSGRAEVA KVHIANEMGP
LPTVDADKRA VKQVLLNLLS NAVKFTPAGG SIHLRGETSG RFVTISVEDT GIGIPASALP
KIGRPFEQVE SQHSKSHKGT GLGLALSRSL VELHGGALVL ESTEGVGTKV SFTLPLTAEA
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