| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0948 |
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| Symbol | |
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| ID | 5453399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1021822 |
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| End bp | 1023432 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876519 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001412228 |
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| Protein GI | 154251404 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATGGG GAGGCAAAAA ATACGATGCG ATCGTGATCG GCGGTGGCCA CAACGGCCTC
GTTGCCGCGG CATATCTTGG CCGCGCCCAC CGGCGCGTGC TGGTGGTCGA AGCGCGAGAT
CATCTCGGCG GCGCCGCCAC AACCGGTGAA ATCTCGCCCG GCTATCACGC ATCCTCCGTG
GCCCACCTGC TCGAAGCATT TCCGCGCCGC ATCGAACGCG AGTTGAAACT CGGCAGACAT
GGCCTGCGCT ATGCGGCGCG AGATGTGCCC ACCATCGCCC TCGACCGCGA TGGAAGGCAT
CTCCTCCTGC CGCGCAGCCG CAAGGAGTTC GCCGCCTTCT CCGCGCGCCT GCCGAAAGAC
GCTGCCGCTT ATCGCGCCTA TCTCGCCCGT CTACAGGCCT TTGCCGCGCT TCTCGCGCCG
CTCTTCGCCG AGCGGCCACC GAAATCCGGT GATGCCGAGG CGTTGCAGCG GCTGCTTCGC
CGCATCGTCT GGCGTGCCGA ACTGAGTGGC GGCAGAACCA TGCGCCGCCT GATGCGCATG
CTGCCCGAAA GCATTGGCGA TCTTCTCGAT GCCGATTTCG AGTCGCCGCT TCTGAAAGGC
GTGCTCGCCT TCGATGCCAC GCTCGGTGGC GGCGAGGGGC CTTATGCTCC GGGCACCGCG
TTCCGTGCGA TCTGCCGCGA GGCTATGCGA ATGCAGGGGC AGGGCGCGCG TCTGCCCGTC
GGTGGCATGG GTGCCGTCGT CGATGCGCTC GCCGCCGCCG TCTCCGCCCA GCGCGGTGAA
ATTCGTGTCG GCGCGCGCGT AGCCCGCATC ATTATCGAGG ACGGCGCGGT CGCGGGAGTC
GAATTGGAAG ACGGCTCCGC CATTCGCGCG CCGCTCGTCG TCTCCTCCGC CGGTCCGCGC
GCCACCATGC TGGATTTGCT GGGGGCGCCT CGACTTGAAA CGGGTCCCGT CACGCAGCTC
CGCTCCCCCG TGCCGAGGGG CGCCGTGGCA AAGGTCAATC TCGCGCTAGA AGGACGCCCG
GAGTTCACAG GTCTTGCGCC GGAATTGTAT GGCGCGCGGC TGATCGTTTC GCCCTCGCTC
GAAGAGCTCG ATCATGCAAG TGCCGTCTTC CGCCAGGGCG GCTTTGCGTC CGATCCGGTC
ATGGAAATCA TCGTGCCAAG CATCGCCGAT GCCACACTCG CACCCCAGGG GCATCATGTA
GTTTCCATTC TCGTCCACTA CACGCCATAT GAAATCGAAC AAGGCTGGCA GTCACGCCGC
GAAGTCTTTG TGCAGCGCGT GGTTCGCGCG CTCGAGCATT ATGCACCAGG TATCGGAGAC
ATCATGGTCG CCGGCGAAAT CCTCACGCCG CCTGACATCG AAAATAAATA TGGCCTTGCC
GGCGGCGACT GGCATCAGGG CGACATCCGC CTCGATCGTC TTTTCGGCTT CCGTCCCGCT
GCATCCTTCG GGCGCTACGG CACATCCGTG CCCGGCCTTT ATCTTTGTGG CGCGGGCAGC
CATCCGGGAG GTGGCGTCAC GGGCCTGCCG GGTCTCCTTG CCGTTGAAAC GATCATCGAG
GAAATGCCCG CCGGAAAGAC CCGGCAGCGA AATGAGGAGG AGCCCGCATG A
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| Protein sequence | MAWGGKKYDA IVIGGGHNGL VAAAYLGRAH RRVLVVEARD HLGGAATTGE ISPGYHASSV
AHLLEAFPRR IERELKLGRH GLRYAARDVP TIALDRDGRH LLLPRSRKEF AAFSARLPKD
AAAYRAYLAR LQAFAALLAP LFAERPPKSG DAEALQRLLR RIVWRAELSG GRTMRRLMRM
LPESIGDLLD ADFESPLLKG VLAFDATLGG GEGPYAPGTA FRAICREAMR MQGQGARLPV
GGMGAVVDAL AAAVSAQRGE IRVGARVARI IIEDGAVAGV ELEDGSAIRA PLVVSSAGPR
ATMLDLLGAP RLETGPVTQL RSPVPRGAVA KVNLALEGRP EFTGLAPELY GARLIVSPSL
EELDHASAVF RQGGFASDPV MEIIVPSIAD ATLAPQGHHV VSILVHYTPY EIEQGWQSRR
EVFVQRVVRA LEHYAPGIGD IMVAGEILTP PDIENKYGLA GGDWHQGDIR LDRLFGFRPA
ASFGRYGTSV PGLYLCGAGS HPGGGVTGLP GLLAVETIIE EMPAGKTRQR NEEEPA
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